isSOC1, isSOC1 (genetic_marker) Prunus avium | GDR

Marker Overview

Marker Overview


Name	SOC1
Genbank ID	N/A
Type	candidate gene marker
Species	Prunus avium
Primer 1	isSOC1.Forward: GCTGCTAGGGCTTTCTCCTT
Primer 2	isSOC1.Reverse: TATGCAGCACCTGAAGCAAG
Publication	[view all]
Comment	peach homologue was located on the peach genome sequence and then located into the sweet cherry map using flanking markers

Publications


Year	Publication
2015	Castède S, Campoy JA, Le Dantec L, Quero-García J, Barreneche T, Wenden B, Dirlewanger E. Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium). PloS one. 2015; 10(11):e0143250.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Sweet Cherry-RL-F1-2015	R5	N/A	18.59	SOC1	View

Alignments

Feature Name	Type	Location	Analysis
PAV02_REGINA	chromosome	PAV02_REGINA:27930631..27931186.	Prunus avium Regina Genome v1.0 Assembly & Annotation
chr_2	chromosome	chr_2:33885630..33886185.	Prunus avium Tieton Genome v2.0 Assembly & Annotation