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Marker Overview
| Name | s7_9680726 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | TTCTGATTCTCTATAACGCCAAACACACAGTACAAGTTAACAGTAATTAAAATGACAACT
TGAGTATAAAAAAATATATATATCACAACAGAGCCGCTAACCAGAATCAACAGCTTTAAT
TTCCCTCATTGTAGCATCAGCTGACATCAA |
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| 3' Flanking Sequence | GGGTTAATAAAGAACTGAGCAAATCTGAACAATAAACCACACATCAACACAATGTTCAAT
TTTGAGAATTGTAATGATGAAAATAACAGCCAATAGAAGGAAAAGCAGCATCAACCTGTC
CAAAGCCTCTTCAAAGGCATCAGCATTAAT |
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| Species | Prunus avium |
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| Publication | [view all] |
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| Contact | Patricio Hinrichsen
Stijn Vanderzande
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| Comment | sweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intergenic SNPs |
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2015 | Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
| 2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>s7_9680726 ID=s7_9680726; Name=s7_9680726; organism=Prunus avium; type=genetic_marker; length=301bp
TTCTGATTCTCTATAACGCCAAACACACAGTACAAGTTAACAGTAATTAA
AATGACAACTTGAGTATAAAAAAATATATATATCACAACAGAGCCGCTAA
CCAGAATCAACAGCTTTAATTTCCCTCATTGTAGCATCAGCTGACATCAA
YGGGTTAATAAAGAACTGAGCAAATCTGAACAATAAACCACACATCAACA
CAATGTTCAATTTTGAGAATTGTAATGATGAAAATAACAGCCAATAGAAG
GAAAAGCAGCATCAACCTGTCCAAAGCCTCTTCAAAGGCATCAGCATTAA
T
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