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Marker Overview
| Name | s8_4231725 |
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| dbSNP ID | N/A |
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| SNP Array ID | | Cherry 6+9K SNP array: | s8_4231725 |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | CAGCCATGGAAAAGGTCGAGGTAGCAGAGATGGGAACAAATCCAATGATGATTCCAGCAG
CAAAGACACTTATGATTCCGGCAGTAGCAATAGAGGCTAAAATAATTCTGGAGGTAACAG
CAGCAGAGGCCGAAGGCAGTCATACAATCA |
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| 3' Flanking Sequence | GATTCGAATGTCGACAAATCAAATGTCGAGTGTTTCAGGTGTGGCAATTATGGTCATTAC
AGGTCTGAATGTTACACAAATATGAATAAAGTAAAAGGTGCAAGGACGAATTTTGCAGAG
AAAGAGAAAGAAGATGACGGGGCTATTATA |
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| Species | Prunus avium |
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| Publication | [view all] |
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| Contact | Patricio Hinrichsen
Stijn Vanderzande
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| Comment | sweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intergenic SNPs |
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2015 | Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
| 2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>s8_4231725 ID=s8_4231725; Name=s8_4231725; organism=Prunus avium; type=genetic_marker; length=301bp
CAGCCATGGAAAAGGTCGAGGTAGCAGAGATGGGAACAAATCCAATGATG
ATTCCAGCAGCAAAGACACTTATGATTCCGGCAGTAGCAATAGAGGCTAA
AATAATTCTGGAGGTAACAGCAGCAGAGGCCGAAGGCAGTCATACAATCA
YGATTCGAATGTCGACAAATCAAATGTCGAGTGTTTCAGGTGTGGCAATT
ATGGTCATTACAGGTCTGAATGTTACACAAATATGAATAAAGTAAAAGGT
GCAAGGACGAATTTTGCAGAGAAAGAGAAAGAAGATGACGGGGCTATTAT
A
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