Mdo_F3'H, Mdo_F3'H (genetic_marker) Malus x domestica | GDR

Marker Overview

Marker Overview


Name	Mdo_F3'H
Genbank ID	N/A
Type	candidate gene marker
Species	Malus x domestica
Primer 1	Mdo_F3'H.forward primer: AAGGGTAGGGCTAGAAGACACC;CACATTGGTGGAGAATGGTG
Primer 2	Mdo_F3'H.reverse primer: ATAGATGTCGGCAACGTGAA;GCTTCCGTTCCAGCTAAGATT
Max Length	183
Publication	[view all]
Contact	Cindy F. Verdu
Comment	enzymes which could not be mapped.

Contact

Name

Details

Cindy F. Verdu

First name:	Cindy
Last name:	Verdu
Title:	Researcher
Institution:	INRA
Address:	INRA, UMR1345 Institut de Recherche en Horticulture et Semences, Beaucouze, France
Country:	France
Email:	cindyverdu@gmail.com

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr00	chromosome	Chr00:6432809..6432963 .	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	GDR marker alignment to genome using primer sequences
chr1A	chromosome	chr1A:21154262..21154408 .	Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation	GDR marker alignment to genome using primer sequences

Publications


Year	Publication
2014	Verdu CF, Guyot S, Childebrand N, Bahut M, Celton J-M, Gaillard S, Lasserre-Zuber P, Troggio M, Guilet D, Laurens F. QTL Analysis and Candidate Gene Mapping for the Polyphenol Content in Cider Apple. PLoS ONE. 2014; 9(10):e107103.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-X5210X8402-F1-Consensus	LG5	N/A	53.5	F3'H	View