AX-89865141, AX-89865141 (genetic_marker) Fragaria iinumae

Marker Overview
NameAX-89865141
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812121
TypeSNP
SNP AllelesA/G
Probe 1AX-89865141.AX-89865141: ATAAGAGAGACTGGGAAAGTTAGAGTGACC
5' Flanking SequenceCCGGTGTAGCTGCACACATCAGATCCGACCCAGTC
3' Flanking SequenceCCAGTGAGATTGAAAGGGTCAGAGAGAATAGCCTT
SpeciesFragaria iinumae
Publication[view all]
ContactNahla Bassil
CommentF1D (SNP in F. iinumae F1D population)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Fragaria-Fii1N/A32.9AX-89865141View
Sequence
>AX-89865141 ID=AX-89865141; Name=AX-89865141; organism=Fragaria iinumae; type=genetic_marker; length=71bp
CCGGTGTAGCTGCACACATCAGATCCGACCCAGTCRCCAGTGAGATTGAA
AGGGTCAGAGAGAATAGCCTT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:2736234..2736304- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:406387..406457+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:3080198..3080268+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:1944344..1944414+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:25164476..25164546+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:2493076..2493146- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:5262824..5262824. Fragaria vesca Whole Genome v1.1 Assembly & Annotation