AX-89865163, AX-89865163 (genetic_marker) Fragaria iinumae

Marker Overview
NameAX-89865163
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812874
TypeSNP
SNP AllelesA/G
Probe 1AX-89865163.AX-89865163: TAGTTCTCTTACGTCTTGGACTGGAACTTT
5' Flanking SequenceATCCCTGAGTTTCCACACAACAAAGGCCCTCAAGC
3' Flanking SequenceTTTCAAGGTCAGGTTCTGCATTCTCTTGATTACTG
SpeciesFragaria iinumae
Publication[view all]
ContactNahla Bassil
CommentF1D (SNP in F. iinumae F1D population)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Fragaria-Fii1N/A43.33AX-89865163View
Sequence
>AX-89865163 ID=AX-89865163; Name=AX-89865163; organism=Fragaria iinumae; type=genetic_marker; length=71bp
ATCCCTGAGTTTCCACACAACAAAGGCCCTCAAGCRTTTCAAGGTCAGGT
TCTGCATTCTCTTGATTACTG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4871119..4871189+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4108217..4108287+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4453940..4454010+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6462102..6462172+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:208299..208369- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23209630..23209700- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6455944..6455944. Fragaria vesca Whole Genome v1.1 Assembly & Annotation