AX-89809193, AX-89809193 (genetic_marker) Fragaria iinumae

Marker Overview
NameAX-89809193
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812903
TypeSNP
SNP AllelesA/G
Probe 1AX-89809193.AX-89809193: CCTGGACGACCTTCAAGACAACCTCTACGT
5' Flanking SequenceAACCTGGACCTGCTGGAAGTTCTGTTGGAGATGCA
3' Flanking SequenceCTGCTCAGAAGGTTGAGGCACATAAACCTGTTGAT
SpeciesFragaria iinumae
Publication[view all]
ContactNahla Bassil
CommentF1D (SNP in F. iinumae F1D population)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Fragaria-Fii1N/A43.33AX-89809193View
Sequence
>AX-89809193 ID=AX-89809193; Name=AX-89809193; organism=Fragaria iinumae; type=genetic_marker; length=71bp
AACCTGGACCTGCTGGAAGTTCTGTTGGAGATGCARCTGCTCAGAAGGTT
GAGGCACATAAACCTGTTGAT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4926630..4926700+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4162826..4162896+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:5151964..5152034+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23369427..23369497- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6511455..6511455. Fragaria vesca Whole Genome v1.1 Assembly & Annotation