AX-89850538, AX-89850538 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850538
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88891236
TypeSNP
SNP AllelesA/G
Probe 1AX-89850538.AX-89850538: TGTACACGCTACTATAACATGTATTTTAAG
5' Flanking SequenceGTTGAACATGTGCGATGATATTGTACATAAAATTC
3' Flanking SequenceAATGGAAATGAAAAATCCAGATTTAATCATACCTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850538 ID=AX-89850538; Name=AX-89850538; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTTGAACATGTGCGATGATATTGTACATAAAATTCRAATGGAAATGAAAA
ATCCAGATTTAATCATACCTG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:14011393..14011463+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:27351554..27351620+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:8996166..8996236+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:6939467..6939537+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:18061650..18061716- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:15103046..15103116+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:30168758..30168824+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-3 chromosome Fvb5-3:8755425..8755495+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-3 chromosome Fvb5-3:11165839..11165909+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:3032860..3032926+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:21496021..21496068+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:19489144..19489191- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:25641559..25641629- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:4739558..4739628- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:152471..152471. Fragaria vesca Whole Genome v1.1 Assembly & Annotation