AX-89850538, AX-89850538 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850538
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88891236
TypeSNP
SNP AllelesA/G
Probe 1AX-89850538.AX-89850538: TGTACACGCTACTATAACATGTATTTTAAG
5' Flanking SequenceGTTGAACATGTGCGATGATATTGTACATAAAATTC
3' Flanking SequenceAATGGAAATGAAAAATCCAGATTTAATCATACCTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb7chromosomeFvb7:14011393..14011463 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb4chromosomeFvb4:27351554..27351620 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb3chromosomeFvb3:8996166..8996236 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:6939467..6939537 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:18061650..18061716 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7-2chromosomeFvb7-2:15103046..15103116 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-1chromosomeFvb7-1:30168758..30168824 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb5-3chromosomeFvb5-3:8755425..8755495 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb5-3chromosomeFvb5-3:11165839..11165909 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb5-2chromosomeFvb5-2:3032860..3032926 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb5-2chromosomeFvb5-2:21496021..21496068 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-3chromosomeFvb7-3:19489144..19489191 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb5-1chromosomeFvb5-1:25641559..25641629 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-4chromosomeFvb1-4:4739558..4739628 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG7chromosomeLG7:152471..152471 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89850538 ID=AX-89850538; Name=AX-89850538; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTTGAACATGTGCGATGATATTGTACATAAAATTCRAATGGAAATGAAAA
ATCCAGATTTAATCATACCTG