AX-89850524, AX-89850524 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850524
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88897638
TypeSNP
SNP AllelesT/G
Probe 1AX-89850524.AX-89850524: CTTTCTCTCTCCTCTATCCTCTCCTAGTCC
5' Flanking SequenceTGAAAGAAAGAGAGAGGAGATAGGAGAGGATCAGG
3' Flanking SequenceATTTGTCAGAGAGAGCAATTCCAAAAATTTCAACA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb7chromosomeFvb7:16019622..16019692 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb2chromosomeFvb2:9663215..9663287 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:6956173..6956235 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7-3chromosomeFvb7-3:13663451..13663513 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-2chromosomeFvb6-2:2055941..2056011 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-1chromosomeFvb6-1:12940266..12940336 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb3-2chromosomeFvb3-2:1156634..1156696 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-3chromosomeFvb7-3:19494009..19494079 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-4chromosomeFvb6-4:3926335..3926417 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb6-2chromosomeFvb6-2:2056990..2057060 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-4chromosomeFvb4-4:18722523..18722585 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb4-2chromosomeFvb4-2:25050842..25050912 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG7chromosomeLG7:14536486..14536486 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89850524 ID=AX-89850524; Name=AX-89850524; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGAAAGAAAGAGAGAGGAGATAGGAGAGGATCAGGKATTTGTCAGAGAGA
GCAATTCCAAAAATTTCAACA