AX-89850742, AX-89850742 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850742
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88902273
TypeSNP
SNP AllelesC/G
Probe 1AX-89850742.AX-89850742_probe1: TTGTTACTTTACAGATTATTGTTGTATGAC
Probe 2AX-89850742.AX-89860919_probe2: TTGTTACTTTACAGATTATTGTTGTATGAG
5' Flanking SequenceCAATAGAACAATGAAATGTCTAATAACAACATACT
3' Flanking SequenceGACTACAAATGAATTAAAGCTTAGCAAAATTTGCA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850742 ID=AX-89850742; Name=AX-89850742; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CAATAGAACAATGAAATGTCTAATAACAACATACTSGACTACAAATGAAT
TAAAGCTTAGCAAAATTTGCA
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:20769928..20769998- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:20762789..20762859- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:6643410..6643484- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:2743189..2743259+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:28225974..28226044- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:12013016..12013090- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:22150792..22150792. Fragaria vesca Whole Genome v1.1 Assembly & Annotation