MEST028, MEST028 (genetic_marker) Malus sp. | GDR

Marker Overview

Marker Overview


Name	MEST028
Genbank ID	AB627204
Type	EST-SSR
Species	Malus x domestica
Repeat Motif	(AG)19
Primer 1	MEST028.forward primer: ATTGGCATTGCTTCTCACCT
Primer 2	MEST028.reverse primer: TGCAACAACAATTCCCTTCA
Publication	[view all]
Contact	Shigeki Moriya

Contact

Name

Details

Shigeki Moriya

First name:	Shigeki
Last name:	Moriya
Title:	Researcher
Institution:	Apple Research StationNARO Institute of Fruit Tree Science
Address:	Apple Research Station, NARO Institute of Fruit Tree Science, Shimokuriyagawa, Morioka, Iwate 020-0123, Japan
Country:	Japan
Email:	moriyas@affrc.go.jp

Publications


Year	Publication
2012	Moriya S, Iwanami H, Kotoda N, Haji T, Okada K, Terakami S, Mimida N, Yamamoto T, Abe K. Aligned genetic linkage maps of apple rootstock cultivar ‘JM7’ and Malus sieboldii ‘Sanashi 63’ constructed with novel EST-SSRs. Tree genetics & genomes. 2012; 8(4):709-723.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Pear-Ba-F1-2013	Ba2	N/A	6.5	MEST28	View
2	Pear-integrated_consensus_map-IPCG-2017	LG2	N/A	35.38	MEST028	View
3	Apple-JM7xS63-F1	J2	N/A	25.7	MEST028	View
4	Apple-JM7xS63-F1	S2	N/A	21.4	MEST028	View

Alignments

Feature Name	Type	Location	Analysis
Chr02	chromosome	Chr02:5865964..5866123.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr2A	chromosome	chr2A:3528987..3529146.	Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation