MEST089, MEST089 (genetic_marker) Malus sp. | GDR

Marker Overview

Marker Overview


Name	MEST089
Genbank ID	AB627243
Type	EST-SSR
Species	Malus x domestica
Repeat Motif	(AG)13
Primer 1	MEST089.forward primer: TACAGATTTCCGTTCCCCTG
Primer 2	MEST089.reverse primer: AACTCCATAACGCTTCGCTC
Publication	[view all]
Contact	Shigeki Moriya

Contact

Name

Details

Shigeki Moriya

First name:	Shigeki
Last name:	Moriya
Title:	Researcher
Institution:	Apple Research StationNARO Institute of Fruit Tree Science
Address:	Apple Research Station, NARO Institute of Fruit Tree Science, Shimokuriyagawa, Morioka, Iwate 020-0123, Japan
Country:	Japan
Email:	moriyas@affrc.go.jp

Publications


Year	Publication
2012	Moriya S, Iwanami H, Kotoda N, Haji T, Okada K, Terakami S, Mimida N, Yamamoto T, Abe K. Aligned genetic linkage maps of apple rootstock cultivar ‘JM7’ and Malus sieboldii ‘Sanashi 63’ constructed with novel EST-SSRs. Tree genetics & genomes. 2012; 8(4):709-723.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Pear-Ba-F1-2013	Ba5	N/A	16.5	MEST089	View
2	Pear-integrated_consensus_map-IPCG-2017	LG5	N/A	37.33	MEST089	View
3	Apple-JM7xS63-F1	J5	N/A	59	MEST089	View
4	Apple-JM7xS63-F1	S5	N/A	38.6	MEST089	View

Alignments

Feature Name	Type	Location	Analysis
Chr05	chromosome	Chr05:35313767..35314126.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr5A	chromosome	chr5A:34242777..34243133.	Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation