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Marker Overview
Name | JPsnpHou00136 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | T/C |
5' Flanking Sequence | GTACGAGCGTACAGTAACCATGAATTCCTTGGGAAAAACATTCTCCTTGACTGGGTGGAA
GATCGGTTGGGCTATAGCTCCGCCACACCTGTCATGGGGAGTTCGGCAGGCACACTCTTT
TCTCACATTTGCTACCTCCACTCCAATGCAATGGGCAGCTGCAACTGCTCTCAGAGCTCC
AGACTCCTACTATGTGGAGCTGAAAAGAGATTACCAGGCAAAGAAGGCGATTTTGGTCGA
GGGATTGAAATCTGTCGGTTTCAAAGTGTATCCATCAAGCGGTACCTACTTTGTGGTTGT
TGATCACACTCCTTTTGGACTGGAAAATGATGTTGCCTTTTGTGAGTAT |
3' Flanking Sequence | TGATCAAGGAAGTTGGAGTGGTGGCAATCCCCACCAGTGTATTTTACTTAnACCCGGAAG
ATGGAAAGAATCTAGTAAGATTTACCTTCTGCAAAGACGAAGGAACTCTTAGnGCTGCCG
TTGACAGGATGAAGGAGAAGTTGAGAAGATAATTCGAATGGTCGGTTAGAATAAATGGAA
CTCAAACTTGTAATAAGCATCTGAACGGAAGGGATCTTATTCCTGTGCCCTGCAGTTTGA
AGCCATAGTTTTTAGACCTCTGTTAAATAAGATTATTTAGCTTATTAGCTGTGTGGAATT
TTATGTTTTTGTTGAAACAAGCAAAAATGAGCAAGACAAGTAATGAACGGCACGGAGCCT |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
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Comment | SNP position in sequence: 350 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00136 ID=JPsnpHou00136; Name=JPsnpHou00136; organism=Pyrus pyrifolia; type=genetic_marker; length=710bp GTACGAGCGTACAGTAACCATGAATTCCTTGGGAAAAACATTCTCCTTGA CTGGGTGGAAGATCGGTTGGGCTATAGCTCCGCCACACCTGTCATGGGGA GTTCGGCAGGCACACTCTTTTCTCACATTTGCTACCTCCACTCCAATGCA ATGGGCAGCTGCAACTGCTCTCAGAGCTCCAGACTCCTACTATGTGGAGC TGAAAAGAGATTACCAGGCAAAGAAGGCGATTTTGGTCGAGGGATTGAAA TCTGTCGGTTTCAAAGTGTATCCATCAAGCGGTACCTACTTTGTGGTTGT TGATCACACTCCTTTTGGACTGGAAAATGATGTTGCCTTTTGTGAGTATy TGATCAAGGAAGTTGGAGTGGTGGCAATCCCCACCAGTGTATTTTACTTA nACCCGGAAGATGGAAAGAATCTAGTAAGATTTACCTTCTGCAAAGACGA AGGAACTCTTAGnGCTGCCGTTGACAGGATGAAGGAGAAGTTGAGAAGAT AATTCGAATGGTCGGTTAGAATAAATGGAACTCAAACTTGTAATAAGCAT CTGAACGGAAGGGATCTTATTCCTGTGCCCTGCAGTTTGAAGCCATAGTT TTTAGACCTCTGTTAAATAAGATTATTTAGCTTATTAGCTGTGTGGAATT TTATGTTTTTGTTGAAACAAGCAAAAATGAGCAAGACAAGTAATGAACGG CACGGAGCCT
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