SAmsCN492206, SAmsCN492206 (genetic_marker) Malus x domestica | GDR

Marker Overview

Marker Overview


Name	SAmsCN492206
Genbank ID	N/A
Type	SSR
Species	Malus x domestica
Repeat Motif	TTG(10.7)
Primer 1	SAmsCN492206.forward primer: ACATACTGGAGTCTGCGAGC
Primer 2	SAmsCN492206.reverse primer: CAATACGCTAGTGAAGACGC
Publication	[view all]
Contact	Maria M. van Dyk

Contact

Name

Details

Maria M. van Dyk

First name:	Maria
Last name:	van Dyk
Institution:	Department of Biotechnology, University of the Western Cape, Private Bag X17
Address:	Bellville 7535, South Africa
Email:	daleen.vandyk@up.ac.za

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr13	chromosome	Chr13:14955611..14956088 .	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	GDR marker alignment to genome using primer sequences
chr13A	chromosome	chr13A:14455930..14456407 .	Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation	GDR marker alignment to genome using primer sequences

Publications


Year	Publication
2010	van Dyk MM, Soeker MK, Labuschagne IF, Rees DJG. Identification of a major QTL for time of initial vegetative budbreak in apple (Malus x domestica Borkh.). Tree Genetics and Genomes. 2010; 6(3):489-502.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Pear-integrated_consensus_map-IPCG-2017	LG13	N/A	113.58	SAmsCN492206	View