Mdo-HB-10-10a

Haplotype Block Overview
Name Mdo-HB-10-10a
Species Malus x domestica
Stock Haplotype [view all 425]
Haplotype [view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeChr10:7875867..7887052 .Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotationn/a
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 3 4
Rome Beauty Law 3 4
Jonafree 3 4
Redfree 3 7
Spartan 3 4
Wagener 3 6
Worcester Pearmain 7
Tsugaru 3 6
Golden Delicious 3 4
Fuji 3 6
Empire 3
Gala 3 4
Honeycrisp 4
Elstar 3
Marshall McIntosh 3 4
Cripps Pink 4 6
Granny Smith 3 4
Jonathan 4 6
Ralls Janet 2 6
Delicious 3
Discovery 3 7
Prima 4
Fiesta 4 6
Ingrid Marie 3 4
Idared 6
Esopus Spitzenburg 3 4
Braeburn 3
Sansa 3 7
Lodi 4 7
James Grieve 4
Cripps Red 3 6
Burgundy 4
Akane 4 7
Ambrosia 3 4
Aurora Golden Gala 3 4
Beacon 13 4
Ben Davis 3 4
Cameo 3
Chinook 3 4
Clivia 3
Co-op 17 3 4
Co-op 18 3 4
Dayton 3 4 6
Delblush 3
Delorgue 4
Dolgo 2 7
Geheimrat Dr. Oldenburg 3 7
Duchess of Oldenburg 4
Early Cortland 4
Empress 6
F2 26829-2-2 3 4
Fantazja 3 4
Fireside 3 4
Fortune 3
Frostbite 3 4
Ginger Gold 4 7
GMAL 4327 7
GMAL 4328 7
GMAL 4329 4 7
GMAL 4332 7
Goodland 4
Haralson 4 6
Honeygold 4 6
Hudson 3 4
Jersey Black 2 7
Jonamac 3 6
Keepsake 4
Kerr 4 7
Lady Williams 4 6
Liberty 4
Linda 3 4
Liveland Raspberry 10 4
Longfield 3
Macoun 4 7
Malinda 3 6
Mantet 11 7
Melba 10 4
Melrose 3 4
MN 1628 4
MN 1691 4
MN 1706 3 4
MN 1708 4
MN 1760 3 4
MN 1764 4 6
MN 1789 4
MN 1802 4
MN 1836 4 6
MN 1837 4
MN 1839 3 4
MN 1888 4
MN 1899 4
MN 1940 4 6
MN 2016 4 6
AA-44 3 4
Monroe 3 4
Montgomery 4 7
Nicola 3 4
NJ 31 4
NJ 53 3 7
Oriole 4
PRI 14-126 3 4
PRI 14-510 4
PRI 16-144 3
PRI 1661-2 3 4
PRI 855-102 3
Primula 3 4
Raritan 3 4
Regent 4
Russian Seedling 7
Sawa 3 4
Sciros 3 4
Sharon 3 4
Silken 6 7
Wildung 3 4
Splendour 3
State Fair 6 7
NJ 55 3 4
Co-op 29 4 7
Sunrise 4 7
Sweet Sixteen 4
Topaz 3
Vista Bella 3 6
Wealthy 4
Winesap 3 4
Winter Banana 4 7
Yellow Newtown 3
Yellow Transparent 3 7
0407-0001 4 6
0407-0005 3 6
0407-0006 4 6
0407-0007 4 6
0407-0008 3
0408-0003 3
0408-0004 3 4
0408-0005 3 4
0408-0007 3 4
0408-0008 3 4
0408-0010 3 4
0408-0011 3 4
0408-0014 3 4
0408-0015 3 4
0409-0022 4
0409-0024 3 4
0409-0028 3 4
0409-0030 3 4
0409-0032 4
0409-0035 4
0409-0036 4
0409-0038 4
0409-0039 4
0409-0040 4
0409-0043 3 4
0409-0045 4
0410-0002 3
0410-0003 4
0410-0005 3 4
0410-0006 4
0410-0010 3 4
0410-0011 3 4
0410-0012 3 4
0410-0013 3 4
0410-0015 4
0410-0017 3
0410-0018 3 4
0414-0010 3 4
0414-0015 3 4
0414-0017 4 6
0414-0018 3 4
0414-0019 3 4
0414-0020 3 4
0414-0021 3 4
0415-0001 3 4
0415-0004 3 4
0415-0005 3 4
0415-0011 3 4
0415-0012 3 4
0415-0013 3 4
0415-0014 4
0415-0016 3 4
0415-0017 3 4
0415-0019 3 4
0415-0020 3 4
0415-0025 3 4
AE_HCxJonf-145 4
AE_HCXJonf-148 3 4
AE_HCxJonf-157 4
AE_HCXJonf-162 3 4
AE_HCXJonf-168 4
AE_HCxJonf-175 3 4
AE_HCxJonf-183 3 4
AE_HCxJonf-185 3 4
AE0118-237 4
AE0118-238 4
AE0118-239 4
AE0118-240 4
AE0118-243 4
AE0118-244 4
AE0118-245 4
AE0118-246 4
AE0118-249 4
AE0206-159 3 7
AE0206-160 3 7
AE0206-161 4 7
AE0206-162 4 7
AE0206-163 3 4
AE0206-164 3 4
AE0206-165 4 7
AE0206-167 4 7
AE0206-168 4 7
AE0206-169 4
AE0206-170 4 7
AE0210-146 4
AE0210-147 4
AE0210-149 4 7
AE0210-150 4
AE0210-151 7
AE0210-152 4 7
AE0210-153 4 7
AE0210-154 4
AE0210-157 7
AE0210-158 7
AE0210-159 4
AE0210-162 7
AE0210-163 4
AE0210-164 4 7
AE0210-165 4 7
AE0210-166 4
AE0210-168 4 7
AE0210-169 4 7
AE0210-170 7
AE0210-171 7
AE0210-172 7
AE0210-173 7
AE0210-174 4 7
AE0213-175 7
AE0213-176 7
AE0213-177 7
AE0213-178 7
AE0213-179 4 7
AE0213-180 7
AE0213-181 7
AE0213-182 7
AE0213-183 4 7
AE0213-186 7
AE0213-187 7
AE0213-190 7
AE0213-193 7
AE0213-194 7
AE0213-195 7
AE0213-196 7
AE0213-197 7
AE0213-198 4 7
AE0213-199 7
AE0213-200 4 7
AE0213-201 7
AE0213-202 7
AE0213-205 7
AE0213-206 7
AE0251-323 3 4
AE0251-327 3 4
AE0251-329 4
AE0251-330 3 4
AE0251-331 3 4
AE0251-342 4
AE0251-343 3 4
AE0406-239 4 6
AE0406-254 4 7
AE0406-258 4 6
AE0406-259 4 6
AE0406-263 4 6
AE0406-264 4 6
AE0406-266 4 6
AE0406-271 4
AE0406-274 4 7
AE0406-278 4 7
AE0406-281 4 6
AE0406-286 4 6
AE0406-288 4 7
AE0406-289 4 6
AE0406-294 4 7
AE0406-298 4 6
Minneiska 4 7
NJ 303955 4
PRI 612-1 3 4
Arlet 3 6
Co-op 39 3
Pinova 3
Scired 3 4
Scifresh 3 4
0409-0025 3 4
0409-0026 4
0409-0027 4
0409-0031 4
0409-0033 3 4
0409-0047 3 4
G-14-050 3 4
G-14-052 3 4
G-14-054 3
G-14-055 3
G-14-056 3 4
G-14-057 3 4
G-14-059 3
G-14-060 3 4
G-14-061 3 4
G-14-062 3 4
G-14-064 3 4
G-14-065 3 4
G-14-069 3 4
G-14-067 3
G-14-068 3 4
G-14-071 3 4
G-14-073 3 4
G-14-074 3 4
G-14-075 3 4
G-14-076 3 4
G-14-077 3 4
G-14-078 3
G-14-080 3
G-09-232 3 4
G-09-233 3 4
G-09-234 3 4
G-09-235 3 4
G-09-236 3 7
G-09-237 3 7
G-09-238 3 4
G-09-239 3 7
G-09-240 3 7
G-09-241 3 4
G-09-242 3 4
G-09-243 3 4
G-09-245 3 4
G-09-246 3 4
G-09-258 3 7
G-09-259 3 7
G-09-260 3 7
G-09-261 3 7
G-09-262 3 7
G-09-263 3 7
G-09-264 3 4
G-09-265 3 4
G-09-266 3 7
G-09-267 3 4
G-09-268 3 7
0408-0021 3
Wijcik McIntosh 3 4
Beauty of Bath 3
Priam 3 6
Northern Spy 4
Co-op 15 4
MN 1702 4
WA 2 3
WA 5 3 4
Pitmaston Pineapple 4
0411-0011 3
0411-0017 3 6
0411-0023 3 6
AE0250-086 3 4
AE0250-087 4
AE0250-089 3 4
AE0250-090 3 4
AE0250-092 3 4
AE0250-093 4
AE0250-094 4
AE0250-095 3 4
Sonya 3 4
Co-op 38 3 4
AE0250-096 3 4
AE0250-327 3 4
Co-op 30 3
Jonagrimes 3 4
AE0211-036 4 7
G-07-039 3
G-07-041 3 6
BC-8S-27-43 3 4
AE0250-091 4 7
AE0250-097 4 7
AE0250-325 4 7
AE0250-326 4 7
AE0250-329 4 7
AE0250-333 4 7
AE0250-334 4 7
AE0250-335 4 7
AE0250-336 4 7
AE0250-338 4 7
AE0250-341 4 7
AE0211-038 7
AE0211-043 7
AE0211-045 7
AE0211-051 7
G-07-010 3
G-07-014 3 7
G-07-015 3 4
G-07-019 3 7
G-07-020 3
G-07-024 3 4
G-07-032 3 4
G-07-033 3 4
G-07-034 3 7
G-07-044 3 4
AE0211-053 4
AE0211-054 7
AE0250-088 4
AE0250-324 4 7
AE0250-328 4 7
AE0250-331 4 7
AE0250-332 4 7
AE0250-337 4
AE0250-339 4 7
Minnewashta 4 7
Autumn Crisp 3 4
G-14-066 3 4
Lu1-11-010 3
Lu1-11-013 3 6
Lu1-11-016 3 6
Lu1-11-017 3 6
Lu1-11-018 3
NJ 90 3
Lord Lambourne 4 7
Antonovka GH 17 4
Grimes Golden 3
Kidds Orange Red 3
Malus baccata Hansen #2 4 6
Malus baccata Jackii 7
Summerred 16 4
William's Pride 3 4
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-10-10aApple-RosBREED-3.9K-20191014.6414.8
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020