scaffold_8:21773378

Marker Overview
Namescaffold_8:21773378
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:scaffold_8:21773378
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGTCCGAAGGTTGTGGCATGTATATCCGCGGAGGGTACTGGGAAGACCTAGCATCCCAGAT TCGACAAGTCCCATCATCCGATGACCTATGAATGTTATGGG
3' Flanking SequenceGTAAAATAACTAACAGAGAAAAAGATTTCAAGAATTATTTCACTTAATGGCTATAACCAA CATGTTGCATTAAAGGTCTGAAAGACATCATTATGAGTCAC
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Commentweet cherry SNPs identified by Peace et al (2012) that were not used for the original 6K SNP array - intragenic SNPs
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RosBREED-3.8K-20208N/A69.22scaffold_8:21773378View
2Sweet Cherry-V-F1-6+9K_array8N/A72.12scaffold_8:21773378View
3Sweet Cherry-VxC-F1-6+9K_array8N/A74.62scaffold_8:21773378View
Sequence
>scaffold_8:21773378 ID=scaffold_8:21773378; Name=scaffold_8:21773378; organism=Prunus avium; type=genetic_marker; length=203bp
GTCCGAAGGTTGTGGCATGTATATCCGCGGAGGGTACTGGGAAGACCTAG
CATCCCAGATTCGACAAGTCCCATCATCCGATGACCTATGAATGTTATGG
GYGTAAAATAACTAACAGAGAAAAAGATTTCAAGAATTATTTCACTTAAT
GGCTATAACCAACATGTTGCATTAAAGGTCTGAAAGACATCATTATGAGT
CAC
Alignments
Feature NameTypeLocationAnalysis
Pp08 chromosome Pp08:22517606..22517606. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr8 chromosome PAV_r1.0chr8:20683773..20683773. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)