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Transcript Overview
Name | GAPDHB |
Unique Name | JQ302965.1-GAPDHB.m1 |
Type | mRNA |
Organism | Pyrus x bretschneideri () |
Source | genbank |
Product | glyceraldehyde-3-phosphate dehydrogenase B |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
JQ302965.1-GAPDHB.m1-cds1 | JQ302965.1-GAPDHB.m1-cds1 | Pyrus x bretschneideri | CDS |
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
Alignments
Feature Name | Type | Location | Analysis |
JQ302965 |
region |
JQ302965:18..1376+ |
NCBI Rosaceae gene and mRNA sequences |
scaffold00605 |
supercontig |
scaffold00605:82069..84677- |
Pyrus communis Genome v1.0 Draft Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >JQ302965.1-GAPDHB.m1 ID=JQ302965.1-GAPDHB.m1; Name=GAPDHB; organism=Pyrus x bretschneideri; type=mRNA; length=1359bp atggcctcacacgcagctctcgcctcttcgcgagtcccggctaacaccag gcttccctccaagccctcccactcatttcccacccaatgcttctccaaga ggcttgaagttggtgagttttcaggactaagatcgagttcatgtgtgacc tatgcaagcaatggcagagagcaatccttcttcgatactgtcgctgccca gcttactcccaagactgcaggaccaactcctgtcaggggagaaacagtgg caaaattgaaggtggcaatcaacggatttggacgtattggcagaaacttc ctccgatgctggcatggccgcaaggactcacccctcgaagtcattgttgt taatgacagtggtggtgtcaagaatgcttcacacttgctgaaatacgact caatgctgggtactttcaaagcagatgtgaaaatcgttgacaatgagacc atcagcgttgatggtaagcccgtcaaggttgtctctagcagagatcccct gaagcttccatgggctgagatgggcattgacattgttatcgagggaacag gagtctttgtcgatggccctggtgccggcaaacatatccaagccggtgcc aagaaagtcatcattacagctccagcaaaaggtgctgacattcctacaca tgttgtcggggtgaatgaaaaagactacggccacgacgttgccaacattg taagcaatgcttcttgcaccacaaactgcctggctcctttcgtaaagatc ctggatgaagaatttggcattgtcaagggaaccatgacaactactcattc ctacactggagaccagaggctcttggacgcttcacaccgggacttaagga gagccagagcggcagcactaaacatagtccccacaagcactggtgcagca aaggctgtgtcccttgtgctgcctcaactcaaaggcaagctcaacggcat tgccctccgtgtgccaacacctaacgtatcagtggttgaccttgtgatca acgttgcaaagaaaggtatttcagcagaagatgtcaatgcagccttcaga aaggcagcggacggaccacttaagggcatattggcagtgtgcgacgttcc tcttgtgtctgtggacttcaggtgcactgatgtttcctccaccatagact cctccttgaccatggtcatgggtgatgatatggtcaaggtggtggcctgg tacgacaacgaatggggatacagccaaagggttgtggatttggcacattt ggttgcaagcaagtggccaggcgcggcagtagtgggaagcggagacccat tggaggatttctgccagacaaacccggcagacgaggagtgcaaagtctat gaagcatag back to topprotein sequence of GAPDHB >JQ302965.1-GAPDHB.p1 ID=JQ302965.1-GAPDHB.p1; Name=GAPDHB; organism=Pyrus x bretschneideri; type=polypeptide; length=452bp MASHAALASSRVPANTRLPSKPSHSFPTQCFSKRLEVGEFSGLRSSSCVT YASNGREQSFFDTVAAQLTPKTAGPTPVRGETVAKLKVAINGFGRIGRNF LRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDNET ISVDGKPVKVVSSRDPLKLPWAEMGIDIVIEGTGVFVDGPGAGKHIQAGA KKVIITAPAKGADIPTHVVGVNEKDYGHDVANIVSNASCTTNCLAPFVKI LDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAA KAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVAKKGISAEDVNAAFR KAADGPLKGILAVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVAW YDNEWGYSQRVVDLAHLVASKWPGAAVVGSGDPLEDFCQTNPADEECKVY EA back to topmRNA from alignment at JQ302965:18..1376+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >JQ302965.1-GAPDHB.m1 ID=JQ302965.1-GAPDHB.m1; Name=GAPDHB; organism=Pyrus x bretschneideri; type=mRNA; length=1359bp; location=Sequence derived from: JQ302965:18..1376+ (Pyrus x bretschneideri atggcctcacacgcagctctcgcctcttcgcgagtcccggctaacaccag
gcttccctccaagccctcccactcatttcccacccaatgcttctccaaga
ggcttgaagttggtgagttttcaggactaagatcgagttcatgtgtgacc
tatgcaagcaatggcagagagcaatccttcttcgatactgtcgctgccca
gcttactcccaagactgcaggaccaactcctgtcaggggagaaacagtgg
caaaattgaaggtggcaatcaacggatttggacgtattggcagaaacttc
ctccgatgctggcatggccgcaaggactcacccctcgaagtcattgttgt
taatgacagtggtggtgtcaagaatgcttcacacttgctgaaatacgact
caatgctgggtactttcaaagcagatgtgaaaatcgttgacaatgagacc
atcagcgttgatggtaagcccgtcaaggttgtctctagcagagatcccct
gaagcttccatgggctgagatgggcattgacattgttatcgagggaacag
gagtctttgtcgatggccctggtgccggcaaacatatccaagccggtgcc
aagaaagtcatcattacagctccagcaaaaggtgctgacattcctacaca
tgttgtcggggtgaatgaaaaagactacggccacgacgttgccaacattg
taagcaatgcttcttgcaccacaaactgcctggctcctttcgtaaagatc
ctggatgaagaatttggcattgtcaagggaaccatgacaactactcattc
ctacactggagaccagaggctcttggacgcttcacaccgggacttaagga
gagccagagcggcagcactaaacatagtccccacaagcactggtgcagca
aaggctgtgtcccttgtgctgcctcaactcaaaggcaagctcaacggcat
tgccctccgtgtgccaacacctaacgtatcagtggttgaccttgtgatca
acgttgcaaagaaaggtatttcagcagaagatgtcaatgcagccttcaga
aaggcagcggacggaccacttaagggcatattggcagtgtgcgacgttcc
tcttgtgtctgtggacttcaggtgcactgatgtttcctccaccatagact
cctccttgaccatggtcatgggtgatgatatggtcaaggtggtggcctgg
tacgacaacgaatggggatacagccaaagggttgtggatttggcacattt
ggttgcaagcaagtggccaggcgcggcagtagtgggaagcggagacccat
tggaggatttctgccagacaaacccggcagacgaggagtgcaaagtctat
gaagcatag back to topCoding sequence (CDS) from alignment at JQ302965:18..1376+ >JQ302965.1-GAPDHB.m1 ID=JQ302965.1-GAPDHB.m1; Name=GAPDHB; organism=Pyrus x bretschneideri; type=CDS; length=1359bp; location=Sequence derived from: JQ302965:18..1376+ (Pyrus x bretschneideri atggcctcacacgcagctctcgcctcttcgcgagtcccggctaacaccag gcttccctccaagccctcccactcatttcccacccaatgcttctccaaga ggcttgaagttggtgagttttcaggactaagatcgagttcatgtgtgacc tatgcaagcaatggcagagagcaatccttcttcgatactgtcgctgccca gcttactcccaagactgcaggaccaactcctgtcaggggagaaacagtgg caaaattgaaggtggcaatcaacggatttggacgtattggcagaaacttc ctccgatgctggcatggccgcaaggactcacccctcgaagtcattgttgt taatgacagtggtggtgtcaagaatgcttcacacttgctgaaatacgact caatgctgggtactttcaaagcagatgtgaaaatcgttgacaatgagacc atcagcgttgatggtaagcccgtcaaggttgtctctagcagagatcccct gaagcttccatgggctgagatgggcattgacattgttatcgagggaacag gagtctttgtcgatggccctggtgccggcaaacatatccaagccggtgcc aagaaagtcatcattacagctccagcaaaaggtgctgacattcctacaca tgttgtcggggtgaatgaaaaagactacggccacgacgttgccaacattg taagcaatgcttcttgcaccacaaactgcctggctcctttcgtaaagatc ctggatgaagaatttggcattgtcaagggaaccatgacaactactcattc ctacactggagaccagaggctcttggacgcttcacaccgggacttaagga gagccagagcggcagcactaaacatagtccccacaagcactggtgcagca aaggctgtgtcccttgtgctgcctcaactcaaaggcaagctcaacggcat tgccctccgtgtgccaacacctaacgtatcagtggttgaccttgtgatca acgttgcaaagaaaggtatttcagcagaagatgtcaatgcagccttcaga aaggcagcggacggaccacttaagggcatattggcagtgtgcgacgttcc tcttgtgtctgtggacttcaggtgcactgatgtttcctccaccatagact cctccttgaccatggtcatgggtgatgatatggtcaaggtggtggcctgg tacgacaacgaatggggatacagccaaagggttgtggatttggcacattt ggttgcaagcaagtggccaggcgcggcagtagtgggaagcggagacccat tggaggatttctgccagacaaacccggcagacgaggagtgcaaagtctat gaagcatag back to top
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