BPPCT009, BPPCT009 (genetic_marker) Prunus persica

Marker Overview
NameBPPCT009
Genbank IDN/A
TypeSSR
SpeciesPrunus persica
GermplasmOHenry
Source TypeGenomic DNA
Repeat Motif(CT)14
PCR Condition94 C 1 min, 94 C 45 sec, 57 C 45 sec, 72 C 2 min. 35 cycles, 72 C 4min
Primer 1BPPCT009.F primer: ATTCGGGTCGAACTCCCT
Primer 2BPPCT009.Forward primer: ATTCGGGTCGAACTCCCT
Primer 3BPPCT009.R primer: ACGAGCACTAGAGTAACCCTCTC
Primer 4BPPCT009.Reverse primer: ACGAGCACTAGAGTAACCCTCTC
Product Length171
Publication[view all]
ContactE. Dirlewanger
Amy Iezzoni
Contact
NameDetails
E. Dirlewanger
First name:Elisabeth
Last name:Dirlewanger
Institution:INRA
Address:Unite de Recherche sur les Especes Fruitieres et la Vigne, Centre de Bordeaux, BP 81, 33883 Villenave d Ornon cedex, France
Country:France
Email:dirlewan@bordeaux.inra.fr
Amy Iezzoni
First name:Amy
Last name:Iezzoni
Title:Professor
Institution:Michigan State University
Address:A342 PSSB, East Lansing, MI 48824
Country:USA
Email:iezzoni@msu.edu
Phone:517-355-5191 x1391
Keywords:cherry breeder
Last update:Jun 2017
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Germplasm
Stock NameType
OHenryaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Peach-DG-F1-2009G6N/A40BPPCT009BView
2Peach-JF-F2G7N/A1.4BPPCT009BView
3Peach-ScB-F2-2007G4N/A68.35BPPCT009BView
4Peach-CF-F2-20146N/A5.65BPPCT009BView
5Almond-NL-F1-2010G6N/A18.44BPPCT009BView
6Peach-JF-F2-2016LG4N/A78.4BPPCT009BView
7Prunus-TxE-peachV2.0LG6N/A33.3BPPCT009BView
8Peach-CF-F2G6N/A3.6BPPCT009BView
9Peach-JF-F2G4N/A68.5BPPCT009AView
10Prunus-TE-F2G4N/A53.8BPPCT009AView
11Peach-ScB-F2-2007G4N/A68.64BPPCT009AView
12Almond-NL-F1-2010G6N/A24.4BPPCT009AView
13Sweet Cherry-EFxNY-F1-2008NY6N/A49.21BPPCT009View
14Prunus-TE-F2G6N/A33.3BPPCT009View
15Sweet Cherry-WL-F1-FrameworkFG2N/A78BPPCT009View
16Sweet Cherry-WL-F1-2015LG2N/A67.4BPPCT009View
17Sweet Cherry-C-309xC-195-50-F1Pa6N/A47.42BPPCT009View
18Sweet Cherry-PAV_r1.0_consensus_map-F1Pa6N/A89.54BPPCT009View
19Peach-CF-F2-20147N/A13.16BPPCT009CView
20Peach-CF-F2G7N/A3.9BPPCT009CView
21Chokecherry-RCxSC-F1-2014RC IXN/A203.1BPPCT009-1View
22Chokecherry-RCxSC-F1-2017Cho-9N/A26.5BPPCT009-1View
Alignments
Feature NameTypeLocationAnalysis
scaffold_6 supercontig scaffold_6:11863113..11863113. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp06 chromosome Pp06:11877894..11878074. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)