EMFv010 (genetic_marker) Fragaria vesca

Marker Overview
NameEMFv010
Genbank IDAJ508253
TypeSSR
SpeciesFragaria vesca
GermplasmRuegen
Source Typegenomic clone
Repeat MotifMixed
17mer
PCR ConditionFinal reaction volume of 12.5ul comprising 1.5ul template DNA, 1x PCR buffer, 1.5mM Mg2+, 200 M dNTPs, 0.2uM each primer and 0.25U Taq polymerase. PCR cycles: initial denaturation step of 94oC (2min), then 10 cycles of 94oC (30s), 55-50oC annealing temperature decreasing by 0.5oC per cycle (45s) and 72oC (1min), followed by 25 cycles of 94oC (30s), 50oC (45s) and 72oC (1min), and a final elongation step of 72oC (5min)
Primer 1EMFv010.EMFv010F: AATGGCGCCGTCCTTGAGCA
Primer 2EMFv010.EMFv010R: AAAACCCTAGCCCTACCCCACCTTC
Primer 3EMFv010.Forward: AATGGCGCCGTCCTTGAGCA
Primer 4EMFv010.Reverse (no gttt): AAAACCCTAGCCCTACCCCACCTTC
Publication[view all]
ContactD. Sargent
Eric van de Weg
Commentc: present in one parent only (1:1 segregation), h: heterozyogous (1:3 segregation), d: distorted c markers, y:distorted h markers
Contact
NameDetails
D. Sargent
First name:Dan
Last name:Sargent
Institution:East Malling Research
Address:New Road, East Malling, Kent ME19 6BJ, UK
Email:dan.sargent@emr.ac.uk
Phone:+44 1732 523747
Eric van de Weg
First name:Eric
Last name:van de Weg
Title:researcher
Institution:Wageningen-UR Plant Breeding, Wageningen University and Research Centre
Address:P.O. Box 16, 6700 AA Wageningen, The Netherlands
Country:The Netherlands
Email:eric.vandeweg@wur.nl
Keywords:allo-octoploid strawberry
Germplasm
Stock NameType
Ruegenaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-232x1392-F1VI-2N/A3.67EMFv010-170View
2Strawberry-232x1392-F1VI-7N/A8.43EMFv010-180View
3Strawberry-HK-F1LG6AN/A78EMFv010View
4Strawberry-HK-F1LG6BN/A91EMFv010View
5Strawberry-HK-F1LG6CN/A83.7EMFv010View
6Strawberry-HK-F1LG6DN/A72EMFv010View
7Strawberry-RVxFB-NIL-2017LG6N/A83.6EMFv010View
8Strawberry-232x1392-F1-2015LGVI-2N/A39.56EMFv010-170hView
9Strawberry-232x1392-F1-2015LGVI-7N/A19.51EMFv010-180hView