EMFvi099 (genetic_marker) Fragaria viridis

Marker Overview
NameEMFvi099
Genbank IDAJ564343
TypeSSR
SpeciesFragaria viridis
GermplasmEMR-903
Source Typegenomic clone
Repeat MotifTC
PCR ConditionFinal reaction volume of 12.5ul comprising 1.5ul template DNA, 1x PCR buffer, 1.5mM Mg2+, 200 M dNTPs, 0.2uM each primer and 0.25U Taq polymerase. PCR cycles: initial denaturation step of 94oC (2min), then 10 cycles of 94oC (30s), 55-50oC annealing temperature decreasing by 0.5oC per cycle (45s) and 72oC (1min), followed by 25 cycles of 94oC (30s), 50oC (45s) and 72oC (1min), and a final elongation step of 72oC (5min)
Primer 1EMFvi099.EMFvi099F: CGTTAACTGTAAAATCCCCTCG
Primer 2EMFvi099.EMFvi099R: GAGCCAATCTCTGACCTCAACT
Publication[view all]
ContactD. Sargent
Contact
NameDetails
D. Sargent
First name:Dan
Last name:Sargent
Institution:East Malling Research
Address:New Road, East Malling, Kent ME19 6BJ, UK
Email:dan.sargent@emr.ac.uk
Phone:+44 1732 523747
Germplasm
Stock NameType
EMR-903accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Fragaria-FVxFN-F2-2010FG2N/A0EMFvi099View
Sequence
>EMFvi099 ID=EMFvi099; Name=EMFvi099; organism=Fragaria viridis; type=genetic_marker; length=154bp
CGTTAACTGTAAAATCCCCTCGTTTAAGATAAACTTAGCAAACTACTCCT
CCCCCCCCTCTCTCTCTCTCTCTCTCTCATCACATCAGGGCTGGAGCTGG
GAGGTTCTTGCTGACTATGACGGAGCAGGTGGAGTTGAGGTCAGAGATTG
GCTC