EPDCU5060, EPDCU5060 (genetic_marker) Prunus dulcis

Marker Overview
NameEPDCU5060
Genbank IDBU575060
TypeSSR
SpeciesPrunus dulcis
GermplasmNonpareil
Repeat MotifGAT
PCR Condition94 C 2 min, 94 C 25 sec, 55 C 20 sec, 72 C 20 sec. 35 cycles, 72 C 5 min
Primer 1EPDCU5060.F primer: ACCAAATTGGACATGCAACC
Primer 2EPDCU5060.R primer: CGGTCGAGAAGACTGAGGAG
Product Length113
Publication[view all]
ContactW. Howad
Amy Iezzoni
Contact
NameDetails
W. Howad
First name:Werner
Last name:Howad
Institution:IRTA
Address:Institut de Recerca I Tecnologia Agroalimentaries (IRTA), Departament de Genetica Vegetal, Carretera de Cabrils s/n, 08348 Cabrils, Spain
Email:werner.howad@irta.es
Amy Iezzoni
First name:Amy
Last name:Iezzoni
Title:Professor
Institution:Michigan State University
Address:A342 PSSB, East Lansing, MI 48824
Country:USA
Email:iezzoni@msu.edu
Phone:517-355-5191 x1391
Keywords:cherry breeder
Last update:Jun 2017
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
GDR Markers Database2004-01-01
Alignment of genetic markers to Prunus persics v2.02019-04-11
Germplasm
Stock NameType
Nonpareilaccession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-F2G4N/A1.8EPDCU5060View
2Sweet Cherry-EFxNY-F1-2008NY4N/A6.44EPDCU5060View
3Peach-DvsS-BC2LG4N/A2EPDCU5060View
4Prunus-TE-BC1-T1EG4_T1EN/A1.1EPDCU5060View
5Prunus-TE-BC1-EG4_EN/A0EPDCU5060View
6Prunus-TxE-peachV2.0LG4N/A1.8EPDCU5060View
7Sweet Cherry-C-303xBeniyutaka-F1Pa4N/A13.09EPDCU5060View
8Sweet Cherry-C-303xBenikirari-F1Pa4N/A5.26EPDCU5060View
9Sweet Cherry-C-309xC-195-50-F1Pa4N/A0EPDCU5060View
10Sweet Cherry-C-309xBenikirari-F1Pa4N/A24.35EPDCU5060View
11Sweet Cherry-PAV_r1.0_consensus_map-F1Pa4N/A28.65EPDCU5060View
Alignments
Feature NameTypeLocationAnalysis
scaffold_4 supercontig scaffold_4:484115..484665. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp04 chromosome Pp04:484135..484685+ Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)