SNP_IGA_711368, SNP_IGA_711368 (genetic_marker) Prunus persica

Marker Overview
NameSNP_IGA_711368
dbSNP IDN/A
SNP Array ID
IRSC 9K SNP array for peach:SNP_IGA_711368
IRSC 16K SNP array for peach:SNP_IGA_711368
TypeSNP
SNP Alleles[A/G]
SpeciesPrunus persica
Source TypeWGS
Primer 1SNP_IGA_711368_LEFT_primer_0: CGTGATTTTGAGGATTCAGGTT
Primer 2SNP_IGA_711368_RIGHT_primer_0: CTACGGAAAGTTGTCTTCCACC
Product Length203
Publication[view all]
ContactPere Arus
Ksenija Gasic
Contact
NameDetails
Pere Arus
First name:Pere
Last name:Arus
Title:Researcher
Institution:IRTA
Address:IRTA, Centre de Recerca en Agrigeno`mica CSIC-IRTA-UAB-UB; Campus UAB, Bellaterra (Cerdanyola del Valle`s), 08193 Barcelona, Spain
Country:Spain
Email:pere.arus@irta.cat
Ksenija Gasic
Description:fruit quality, abiotic and biotic tolerance /resistance
First name:Ksenija
Last name:Gasic
Title:Assistant professor
Institution:Clemson University
Address:112 BRC/ 51 New Cherry Rd, Clemson Sc 29634
Country:USA
Email:kgasic@clemson.edu
Phone:864.656.3664.
Fax:864-656-4960
Keywords:Traditional and molecular plant breeding
Libraries
Library NameType
IRSC 9K SNP array for peachSNP_chip
IRSC 16K SNP array for peachSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC SNP array 9K to Peach Genome v2.0.a12016-11-21
Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)2015-01-15
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Peach-OC-F27N/A6.4SNP_IGA_711368View
2Peach-V6xG-F1-V67N/A5.4SNP_IGA_711368View
3Peach-VV-F2G7N/A0.7SNP_IGA_711368View
4Prunus-TE-BC1-EG7_EN/A5.7SA711368View
5Peach-PF-BC1-2017LG7N/A8.2SNP_IGA_711368View
6Peach-PF-F1-2017LG7N/A7.6SNP_IGA_711368View
Sequence
>SNP_IGA_711368 ID=SNP_IGA_711368; Name=SNP_IGA_711368; organism=Prunus persica; type=genetic_marker; length=121bp
GTATAAGTTGTTTCTCTGCTATTTTCGTTGGCTTGCCAATACAATTTATA
CTTCAACAGARGGGAAGGAGCCGTGCATTTTGGCTAATGAGTCCCAGAGA
GAGGTCAAGGTACTTGAGTGG