RosBREED_snp_tart_cherry_f_Pp2_04236978, RosBREED_snp_tart_cherry_f_Pp2_04236978 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp2_04236978
dbSNP IDss490547057
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp2_04236978
TypeSNP
SNP AllelesA/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate2N/A8.28RosBREED_snp_tart_cherry_f_Pp2_04236978View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate2N/A0.59RosBREED_snp_tart_cherry_f_Pp2_04236978View
3Sweet Cherry-C-F1LG2N/A10.11RosBREED_snp_tart_cherry_f_Pp2_04236978View
4Sweet Cherry-VxC-F1LG2N/A13.05RosBREED_snp_tart_cherry_f_Pp2_04236978View
5Sweet Cherry-CxC-F2LG2N/A19.42RosBREED_snp_tart_cherry_f_Pp2_04236978View
6Sweet Cherry-BCxBC-F2LG2N/A13.67RosBREED_snp_tart_cherry_f_Pp2_04236978View
7Sweet Cherry-C-F1-6+9K_array2N/A10.27RosBREED_snp_tart_cherry_f_Pp2_04236978View
8Sweet Cherry-VxC-F1-6+9K_array2N/A12.01RosBREED_snp_tart_cherry_f_Pp2_04236978View
Sequence
>RosBREED_snp_tart_cherry_f_Pp2_04236978 ID=RosBREED_snp_tart_cherry_f_Pp2_04236978; Name=RosBREED_snp_tart_cherry_f_Pp2_04236978; organism=Prunus cerasus; type=genetic_marker; length=207bp
GAGCCAAATTGTAGTGAGAGTCCAAATTGTAATTGGACTTGGACTTGGAC
GTGAAATAGGACTTTGTATCCAAGTTGGAGTTGGATGTGAAATAGGACTC
C[A/G]TATCCTAGTTGGAGTTGGTGTCAAAGTTGTAATTGGTCTCCAAA
TTGTAGTTGATGTAGACTTTCGAACACTAGGATATAATCTTTCTTTGACT
ATGAAAC
Alignments
Feature NameTypeLocationAnalysis
scaffold_2 supercontig scaffold_2:4236978..4236978. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp02 chromosome Pp02:5982022..5982022. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)