RosBREED_snp_tart_cherry_f_Pp1_39520733, RosBREED_snp_tart_cherry_f_Pp1_39520733 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_39520733
dbSNP IDss490546810
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_39520733
TypeSNP
SNP AllelesT/G
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A66.95RosBREED_snp_tart_cherry_f_Pp1_39520733View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A152.11RosBREED_snp_tart_cherry_f_Pp1_39520733View
3SourCherry-Montx25-F1LG1N/A121.93RosBREED_snp_tart_cherry_f_Pp1_39520733View
4SourCherry-25x25-F1LG1N/A121.93RosBREED_snp_tart_cherry_f_Pp1_39520733View
5Sour Cherry-US-F1LG1N/A121.93RosBREED_snp_tart_cherry_f_Pp1_39520733View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_39520733 ID=RosBREED_snp_tart_cherry_f_Pp1_39520733; Name=RosBREED_snp_tart_cherry_f_Pp1_39520733; organism=Prunus cerasus; type=genetic_marker; length=207bp
GCCATCTGCAAGAGAGATCACTAATTTTAGACTGACAGATATTCAACAAA
ACATGTCCATGAATAAGCTCAGAAGTCAATTGTGAAGCATTATCAAGGAA
A[T/G]AATGAAACCTTCAAATAAATCTCCAAATCATTTCTGTGATATTC
TGCGTCTGTCGCCCCACAATCTGGAATATGCAAACCAATTTCACACTCAC
TTCCCTT
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:39520733..39520733. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:40493996..40493996. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:35229527..35229527. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)