RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1, RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1
dbSNP IDss475877100
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1
50K SNP array for apple:AX-105219970
TypeSNP
SNP AllelesA/G
5' Flanking SequenceCTCAAATGGCAAAATATACAACACACAACAGCGCC
3' Flanking SequenceTGAAATTCATGCTTTAAAAGTTATGGCTGGTAGG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201316N/A64.05RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1View
2Apple-M432-2013-physical-Malus-domestica2N/A6321450RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1View
3Apple-Honeycrisp_Consensus-F116N/A64.73RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1View
Sequence
>RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1 ID=RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1; Name=RosBREEDSNP_SNP_AG_6321450_Lg2_00308_MAF50_1632382_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
CTCAAATGGCAAAATATACAACACACAACAGCGCCRTGAAATTCATGCTT
TAAAAGTTATGGCTGGTAGG
Alignments
Feature NameTypeLocationAnalysis
MDC007319.327 contig MDC007319.327:11748..11748. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr16 chromosome Chr16:28155474..28155474. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr16 chromosome Chr16:28155472..28155472. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation