RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4, RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:

RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4

Type

SNP

SNP Alleles

A/C

Species

Publication

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
MDC011526.407	contig	MDC011526.407:6256..6256 .	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
Chr01	chromosome	Chr01:15315007..15315007 .	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2013	Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-M432-2013	1	N/A	4.76	RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4	View
2	Apple-M432-2013-physical-Malus-domestica	2	N/A	115951	RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4	View
3	Pear-PH-CG-2017	LG7	N/A	70.04	RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4	View