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Marker Overview
| Name | KASP_9.936 |
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| Genbank ID | N/A |
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| Type | KASP |
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| 5' Flanking Sequence | TGCTCGGTATGGGTGATCCTCGAGATCAAAGGCCAAAATCAGCTCAGAAAGT |
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| 3' Flanking Sequence | AGACTAAATATGCGTTTTTCTCAATATGGCTTTGATACAGGTAGCCATAGGA |
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| Species | Prunus avium |
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| Germplasm | Regina |
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| Primer 1 | KASP_9.936.Primer_AlleleX: GAAGGTGACCAAGTTCATGCTAAGGCCAAAATCAGCTCAGAAAGTC |
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| Primer 2 | KASP_9.936.Primer_AlleleY: GAAGGTCGGAGTCAACGGATTAAAGGCCAAAATCAGCTCAGAAAGTT |
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| Primer 3 | KASP_9.936.Primer_Common: GCTACCTGTATCAAAGCCATATTGAGAAA |
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| Publication | [view all] |
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| Contact | Elisabeth Dirlewanger
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Alignments
The following features are aligned
| Feature Name | Type | Location | Analysis | Reference |
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| PAV04_REGINA | chromosome | PAV04_REGINA:9957746..9957746 . | Prunus avium Regina Genome v1.0 Assembly & Annotation | Branchereau C, Hardner C, Dirlewanger E, Wenden B, Le Dantec L, Alletru D, Parmentier J, Ivančič A, Giovannini D, Brandi F, Lopez-Ortega G, Garcia-Montiel F, Quilot-Turion B, Quero-García J. Genotype-by-environment and QTL-by-environment interactions in sweet cherry (Prunus avium L.) for flowering date.. Frontiers in plant science. 2023; 14:1142974. |
Publications
| Year | Publication |
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| 2022 | Branchereau C, Quero-García J, Echagüe NHZ, Lambelin L, Fouché M, Wenden B, Donkpegan A, Le Dantec L, Barreneche T, Alletru D, Parmentier J, Dirlewanger E. New insights into flowering date in Prunus: fine mapping of a major QTL in sweet cherry.. Horticulture research. 2022 Feb 19. |
Germplasm
| Stock Name | Type |
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| Regina | accession |
Sequence
>KASP_9.936 ID=KASP_9.936; Name=KASP_9.936; organism=Prunus avium; type=genetic_marker; length=105bp
TGCTCGGTATGGGTGATCCTCGAGATCAAAGGCCAAAATCAGCTCAGAAA
GTYAGACTAAATATGCGTTTTTCTCAATATGGCTTTGATACAGGTAGCCA
TAGGA
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