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Marker Overview
Name | KASP_9.958 |
Genbank ID | N/A |
Type | KASP |
5' Flanking Sequence | ATGCATGATGAAACATAGCTTCTTGTGGTTCTGGAGGACAAATATGACTTG |
3' Flanking Sequence | CATGGGGCAATCTGGTACTCTCAAGGACTCTCTAGTGGTAGGATTGAATAT |
Species | Prunus avium |
Germplasm | Regina |
Primer 1 | KASP_9.958.Primer_AlleleX: GAAGGTGACCAAGTTCATGCTGAGAGTACCAGATTGCCCCATGT |
Primer 2 | KASP_9.958.Primer_AlleleY: GAAGGTCGGAGTCAACGGATTAGAGTACCAGATTGCCCCATGC |
Primer 3 | KASP_9.958.Primer_Common: TTGTGGTTCTGGAGGACAAATATGACTT |
Publication | [view all] |
Contact | Elisabeth Dirlewanger
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Alignments
The following features are aligned
Feature Name | Type | Location | Analysis | Reference |
PAV04_REGINA | chromosome | PAV04_REGINA:9935681..9935681 . | Prunus avium Regina Genome v1.0 Assembly & Annotation | Branchereau C, Hardner C, Dirlewanger E, Wenden B, Le Dantec L, Alletru D, Parmentier J, Ivančič A, Giovannini D, Brandi F, Lopez-Ortega G, Garcia-Montiel F, Quilot-Turion B, Quero-García J. Genotype-by-environment and QTL-by-environment interactions in sweet cherry (Prunus avium L.) for flowering date.. Frontiers in plant science. 2023; 14:1142974. |
Publications
Year | Publication |
2022 | Branchereau C, Quero-García J, Echagüe NHZ, Lambelin L, Fouché M, Wenden B, Donkpegan A, Le Dantec L, Barreneche T, Alletru D, Parmentier J, Dirlewanger E. New insights into flowering date in Prunus: fine mapping of a major QTL in sweet cherry.. Horticulture research. 2022 Feb 19. |
Germplasm
Stock Name | Type |
Regina | accession |
Sequence
>KASP_9.958 ID=KASP_9.958; Name=KASP_9.958; organism=Prunus avium; type=genetic_marker; length=103bp ATGCATGATGAAACATAGCTTCTTGTGGTTCTGGAGGACAAATATGACTT GRCATGGGGCAATCTGGTACTCTCAAGGACTCTCTAGTGGTAGGATTGAA TAT
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