SFB47, HQ148071.1-SFB47.m1 (mRNA) Prunus armeniaca

Transcript Overview
NameSFB47
Unique NameHQ148071.1-SFB47.m1
TypemRNA
OrganismPrunus armeniaca (Apricot)
Sourcegenbank
ProductS-locus F-box protein 47
Genbank NoteGSI
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HQ148071.1-SFB47.m1-cds1HQ148071.1-SFB47.m1-cds1Prunus armeniacaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
SFB47HQ148071.1-SFB47.p1Prunus armeniacapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI320524511
nuccoreHQ148071.1
Alignments
Feature NameTypeLocationAnalysis
HQ148071 region HQ148071:1..434+ NCBI Rosaceae gene and mRNA sequences
scaffold_3 supercontig scaffold_3:2482815..2483239+ Prunus persica Whole Genome v1.0 Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>HQ148071.1-SFB47.m1 ID=HQ148071.1-SFB47.m1; Name=SFB47; organism=Prunus armeniaca; type=mRNA; length=434bp
tgtttatctactttgcctccaccacgaagattttgaacgtaaattcgatg
ttgacgacccttttgtgaaacaagaccttcagtggtcacttttttccaat
gaaacatttgagcagcgtttcaagttaaagcatcccttacggagcacaga
gcattttgggatatacggttcaagcaacggggtactttgcatttcggatg
aaatattgaaacccaagagccgtatacacatatggaacccaaccattggc
aagtataggactgttccgttgagcatcaccgacgacacgaaatttggcta
cattgctctccaattcgggttccaccccggggttaatgactacaaggttg
tgaggatgatgtgcatggacaacaaagcattcgctgtcgaggtttatagt
cttgccacaaactcttggaagatgattgaagcaa
back to top

protein sequence of SFB47

>HQ148071.1-SFB47.p1 ID=HQ148071.1-SFB47.p1; Name=SFB47; organism=Prunus armeniaca; type=polypeptide; length=144bp
VYLLCLHHEDFERKFDVDDPFVKQDLQWSLFSNETFEQRFKLKHPLRSTE
HFGIYGSSNGVLCISDEILKPKSRIHIWNPTIGKYRTVPLSITDDTKFGY
IALQFGFHPGVNDYKVVRMMCMDNKAFAVEVYSLATNSWKMIEA
back to top

mRNA from alignment at HQ148071:1..434+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HQ148071.1-SFB47.m1 ID=HQ148071.1-SFB47.m1; Name=SFB47; organism=Prunus armeniaca; type=mRNA; length=434bp; location=Sequence derived from: HQ148071:1..434+ (Prunus armeniaca
tgtttatctactttgcctccaccacgaagattttgaacgtaaattcgatg
ttgacgacccttttgtgaaacaagaccttcagtggtcacttttttccaat
gaaacatttgagcagcgtttcaagttaaagcatcccttacggagcacaga
gcattttgggatatacggttcaagcaacggggtactttgcatttcggatg
aaatattgaaacccaagagccgtatacacatatggaacccaaccattggc
aagtataggactgttccgttgagcatcaccgacgacacgaaatttggcta
cattgctctccaattcgggttccaccccggggttaatgactacaaggttg
tgaggatgatgtgcatggacaacaaagcattcgctgtcgaggtttatagt
cttgccacaaactcttggaagatgattgaagcaa
back to top

Coding sequence (CDS) from alignment at HQ148071:1..434+

>HQ148071.1-SFB47.m1 ID=HQ148071.1-SFB47.m1; Name=SFB47; organism=Prunus armeniaca; type=CDS; length=434bp; location=Sequence derived from: HQ148071:1..434+ (Prunus armeniaca
tgtttatctactttgcctccaccacgaagattttgaacgtaaattcgatg
ttgacgacccttttgtgaaacaagaccttcagtggtcacttttttccaat
gaaacatttgagcagcgtttcaagttaaagcatcccttacggagcacaga
gcattttgggatatacggttcaagcaacggggtactttgcatttcggatg
aaatattgaaacccaagagccgtatacacatatggaacccaaccattggc
aagtataggactgttccgttgagcatcaccgacgacacgaaatttggcta
cattgctctccaattcgggttccaccccggggttaatgactacaaggttg
tgaggatgatgtgcatggacaacaaagcattcgctgtcgaggtttatagt
cttgccacaaactcttggaagatgattgaagcaa
back to top