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Transcript Overview
| Name | CCD7 |
|---|
| Unique Name | KF887975.1-CCD7.m1 |
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| Type | mRNA |
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| Organism | Malus micromalus () |
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| Source | genbank |
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| Product | carotenoid cleavage dioxygenase 7 |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KF887975.1-CCD7.m1-cds1 | KF887975.1-CCD7.m1-cds1 | Malus micromalus | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| CCD7 | KF887975.1-CCD7.p1 | Malus micromalus | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| KF887975 |
region |
KF887975:1..1845+ |
NCBI Rosaceae gene and mRNA sequences |
| Chr07 |
chromosome |
Chr07:12706110..12712306+ |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >KF887975.1-CCD7.m1 ID=KF887975.1-CCD7.m1; Name=CCD7; organism=Malus micromalus; type=mRNA; length=1845bp
atgcaagccaaccccttccaagttattcccaaactaatattcccctcact
gataaagctgcctccggttcaccgatctctgtcaccaccacccaccaagc
caccgcgtgcgatatccatctccacgcccggtgaaaccgatcatgctcct
attatttcatcaaccgtagatgttgttgatgactcagtggctgcattttg
ggactaccaatttctctttgtgtcccaacgctccgaacaaactgaaccca
tcacgctcagagtcgtggagggttcggttccaccggactttccctctggc
acatactacttgacagggccggggctcttcagcgacgaccatggctcgac
ggtgcacccattagacggtcacggataccttagggcttttcagcttgatg
gctttggcggagaagtcaagttcatggctaagtacgtgaaaactgaggct
caagttgaagagcacgaccctacgactgacaggtggcgattcacacatag
ggggccgttttcggtgttgaaaggtggacagaaagttgggaatactaagg
ttatgaagaatgtggcaaatactagtgtcttgaggtggggccggaagctg
ttgtgcttgtgggaaggtggcaacccatatgagattgaatctgagacgtt
ggatacggtagggaaggtaagtttgatggaaggctgtgattcggggacag
agagtggagacggtggtggtggtggaatgtgggatgtggctgcgaggttg
ctcaaaccgattttgtacggagtgtttaagatgcctccaaagcgactatt
gtctcattataagctcgatgctcgcaacaacaggcttcttatggtgtcat
gcaatgcagaggacatgctattaccttgcagtaattttacattttatgaa
tttgattcagatttcaaggtgctgggaaagcaagagttcaacatccctga
tcacttgatgatccacgattgggctttcacaggcactcattatataatat
ttgctaatcgcatcaagcttgatgctgtcggtgcaatgacagcagtttgc
ggggctactcctatgataacagcattgtcagtgaaccctagcaagtccac
atctcccatatatttgcttcctcggcctagtaatgaaaatggcagagatt
ggagagtgcctattgaagcgtcttcacaattgtggttcctacatgtatgc
aatgcttttgagaatttggatgagaatgggaatttggatattcaaatcca
tgcttctgcttgctcttacgagtggttcaatttccagaaattatttggat
atgattggcaaagtggtaaactagacccttcggttatgaacataaatgga
cgccaaagcaatcacttgcctcatcttattcaggtttccatcaacttgga
tagcaacgggaactgtcaaagatgtgatgtggagtctttaaaccagtgga
acaagtcatcagattttccagttatcaacccagccttttcaggtagtaag
aacacatacatatatgcagcagcaacttcaggttctcgcagttcgttgcc
acactttccatttgacatggtggtgaagctaaatgctgcatctaaatctg
tgctcacatggtctgttggtagtcgaaaattcatcggagagcctattttt
atccccaagggctctgaagaagatgatggctacattctcgtagttgagta
tgcagtttcagttcaaaggtgctatctagttatcttagattccaagaaga
ttggaggagctgatgcactagtagcaagacttgaagtccccaagcacctg
aatttccctcttggttttcatggtttctgggccactgcagcgtag back to topprotein sequence of CCD7 >KF887975.1-CCD7.p1 ID=KF887975.1-CCD7.p1; Name=CCD7; organism=Malus micromalus; type=polypeptide; length=614bp
MQANPFQVIPKLIFPSLIKLPPVHRSLSPPPTKPPRAISISTPGETDHAP
IISSTVDVVDDSVAAFWDYQFLFVSQRSEQTEPITLRVVEGSVPPDFPSG
TYYLTGPGLFSDDHGSTVHPLDGHGYLRAFQLDGFGGEVKFMAKYVKTEA
QVEEHDPTTDRWRFTHRGPFSVLKGGQKVGNTKVMKNVANTSVLRWGRKL
LCLWEGGNPYEIESETLDTVGKVSLMEGCDSGTESGDGGGGGMWDVAARL
LKPILYGVFKMPPKRLLSHYKLDARNNRLLMVSCNAEDMLLPCSNFTFYE
FDSDFKVLGKQEFNIPDHLMIHDWAFTGTHYIIFANRIKLDAVGAMTAVC
GATPMITALSVNPSKSTSPIYLLPRPSNENGRDWRVPIEASSQLWFLHVC
NAFENLDENGNLDIQIHASACSYEWFNFQKLFGYDWQSGKLDPSVMNING
RQSNHLPHLIQVSINLDSNGNCQRCDVESLNQWNKSSDFPVINPAFSGSK
NTYIYAAATSGSRSSLPHFPFDMVVKLNAASKSVLTWSVGSRKFIGEPIF
IPKGSEEDDGYILVVEYAVSVQRCYLVILDSKKIGGADALVARLEVPKHL
NFPLGFHGFWATAA back to topmRNA from alignment at KF887975:1..1845+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >KF887975.1-CCD7.m1 ID=KF887975.1-CCD7.m1; Name=CCD7; organism=Malus micromalus; type=mRNA; length=1845bp; location=Sequence derived from: KF887975:1..1845+ (Malus micromalus
atgcaagccaaccccttccaagttattcccaaactaatattcccctcact
gataaagctgcctccggttcaccgatctctgtcaccaccacccaccaagc
caccgcgtgcgatatccatctccacgcccggtgaaaccgatcatgctcct
attatttcatcaaccgtagatgttgttgatgactcagtggctgcattttg
ggactaccaatttctctttgtgtcccaacgctccgaacaaactgaaccca
tcacgctcagagtcgtggagggttcggttccaccggactttccctctggc
acatactacttgacagggccggggctcttcagcgacgaccatggctcgac
ggtgcacccattagacggtcacggataccttagggcttttcagcttgatg
gctttggcggagaagtcaagttcatggctaagtacgtgaaaactgaggct
caagttgaagagcacgaccctacgactgacaggtggcgattcacacatag
ggggccgttttcggtgttgaaaggtggacagaaagttgggaatactaagg
ttatgaagaatgtggcaaatactagtgtcttgaggtggggccggaagctg
ttgtgcttgtgggaaggtggcaacccatatgagattgaatctgagacgtt
ggatacggtagggaaggtaagtttgatggaaggctgtgattcggggacag
agagtggagacggtggtggtggtggaatgtgggatgtggctgcgaggttg
ctcaaaccgattttgtacggagtgtttaagatgcctccaaagcgactatt
gtctcattataagctcgatgctcgcaacaacaggcttcttatggtgtcat
gcaatgcagaggacatgctattaccttgcagtaattttacattttatgaa
tttgattcagatttcaaggtgctgggaaagcaagagttcaacatccctga
tcacttgatgatccacgattgggctttcacaggcactcattatataatat
ttgctaatcgcatcaagcttgatgctgtcggtgcaatgacagcagtttgc
ggggctactcctatgataacagcattgtcagtgaaccctagcaagtccac
atctcccatatatttgcttcctcggcctagtaatgaaaatggcagagatt
ggagagtgcctattgaagcgtcttcacaattgtggttcctacatgtatgc
aatgcttttgagaatttggatgagaatgggaatttggatattcaaatcca
tgcttctgcttgctcttacgagtggttcaatttccagaaattatttggat
atgattggcaaagtggtaaactagacccttcggttatgaacataaatgga
cgccaaagcaatcacttgcctcatcttattcaggtttccatcaacttgga
tagcaacgggaactgtcaaagatgtgatgtggagtctttaaaccagtgga
acaagtcatcagattttccagttatcaacccagccttttcaggtagtaag
aacacatacatatatgcagcagcaacttcaggttctcgcagttcgttgcc
acactttccatttgacatggtggtgaagctaaatgctgcatctaaatctg
tgctcacatggtctgttggtagtcgaaaattcatcggagagcctattttt
atccccaagggctctgaagaagatgatggctacattctcgtagttgagta
tgcagtttcagttcaaaggtgctatctagttatcttagattccaagaaga
ttggaggagctgatgcactagtagcaagacttgaagtccccaagcacctg
aatttccctcttggttttcatggtttctgggccactgcagcgtag back to topCoding sequence (CDS) from alignment at KF887975:1..1845+ >KF887975.1-CCD7.m1 ID=KF887975.1-CCD7.m1; Name=CCD7; organism=Malus micromalus; type=CDS; length=1845bp; location=Sequence derived from: KF887975:1..1845+ (Malus micromalus
atgcaagccaaccccttccaagttattcccaaactaatattcccctcact
gataaagctgcctccggttcaccgatctctgtcaccaccacccaccaagc
caccgcgtgcgatatccatctccacgcccggtgaaaccgatcatgctcct
attatttcatcaaccgtagatgttgttgatgactcagtggctgcattttg
ggactaccaatttctctttgtgtcccaacgctccgaacaaactgaaccca
tcacgctcagagtcgtggagggttcggttccaccggactttccctctggc
acatactacttgacagggccggggctcttcagcgacgaccatggctcgac
ggtgcacccattagacggtcacggataccttagggcttttcagcttgatg
gctttggcggagaagtcaagttcatggctaagtacgtgaaaactgaggct
caagttgaagagcacgaccctacgactgacaggtggcgattcacacatag
ggggccgttttcggtgttgaaaggtggacagaaagttgggaatactaagg
ttatgaagaatgtggcaaatactagtgtcttgaggtggggccggaagctg
ttgtgcttgtgggaaggtggcaacccatatgagattgaatctgagacgtt
ggatacggtagggaaggtaagtttgatggaaggctgtgattcggggacag
agagtggagacggtggtggtggtggaatgtgggatgtggctgcgaggttg
ctcaaaccgattttgtacggagtgtttaagatgcctccaaagcgactatt
gtctcattataagctcgatgctcgcaacaacaggcttcttatggtgtcat
gcaatgcagaggacatgctattaccttgcagtaattttacattttatgaa
tttgattcagatttcaaggtgctgggaaagcaagagttcaacatccctga
tcacttgatgatccacgattgggctttcacaggcactcattatataatat
ttgctaatcgcatcaagcttgatgctgtcggtgcaatgacagcagtttgc
ggggctactcctatgataacagcattgtcagtgaaccctagcaagtccac
atctcccatatatttgcttcctcggcctagtaatgaaaatggcagagatt
ggagagtgcctattgaagcgtcttcacaattgtggttcctacatgtatgc
aatgcttttgagaatttggatgagaatgggaatttggatattcaaatcca
tgcttctgcttgctcttacgagtggttcaatttccagaaattatttggat
atgattggcaaagtggtaaactagacccttcggttatgaacataaatgga
cgccaaagcaatcacttgcctcatcttattcaggtttccatcaacttgga
tagcaacgggaactgtcaaagatgtgatgtggagtctttaaaccagtgga
acaagtcatcagattttccagttatcaacccagccttttcaggtagtaag
aacacatacatatatgcagcagcaacttcaggttctcgcagttcgttgcc
acactttccatttgacatggtggtgaagctaaatgctgcatctaaatctg
tgctcacatggtctgttggtagtcgaaaattcatcggagagcctattttt
atccccaagggctctgaagaagatgatggctacattctcgtagttgagta
tgcagtttcagttcaaaggtgctatctagttatcttagattccaagaaga
ttggaggagctgatgcactagtagcaagacttgaagtccccaagcacctg
aatttccctcttggttttcatggtttctgggccactgcagcgtag back to top
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