CBF5, KC603713.1-CBF5.m1 (mRNA) Malus x domestica

Transcript Overview
NameCBF5
Unique NameKC603713.1-CBF5.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductC-repeat binding factor 5
Genbank NoteCBF5; AP2/ ERF domain transcription factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KC603713.1-CBF5.m1-cds1KC603713.1-CBF5.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBF5KC603713.1-CBF5.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI506484520
nuccoreKC603713.1
Alignments
Feature NameTypeLocationAnalysis
KC603713 region KC603713:1..663+ NCBI Rosaceae gene and mRNA sequences
Chr01 chromosome Chr01:29427233..29427893- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr1 chromosome chr1:25251008..25251668+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr1 chromosome chr1:31530731..31531391- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>KC603713.1-CBF5.m1 ID=KC603713.1-CBF5.m1; Name=CBF5; organism=Malus x domestica; type=mRNA; length=663bp
atggatgctttctctcattactacgtggacccgcagccggaatcgtcgtc
cgcttctgacgccaacagttctcgccccatgttcatgaacttgtcggacg
aggaggtcctgctggcgtccacttacccgaagaagcaggctggacggaag
aagtttaaagagacaaggcaccctgtgtaccgcggtgtccggaggaggaa
ctccggcaagtgggtgtccgaggtccgggagcccaacaaaaagacaagga
tttggctgggaacatttcccacagccgaaatggccgcgcgcgctcatgat
gtggcggccattgcgctgagggggaggtcggcttgcctcaactttgccga
ctctgcgtggcggctaccagtcccggcctccgccaacgcgaaggatattc
aaactgccgcggcggaagcagcagaacagtttcggccggtggaagagtcg
gatgaggcttgtggtgcttctgcggtggctccctcggagtgcacgtcagc
gccggagcaacaagtgcattttatggatgaggaagcggtttttgggatgc
cgggactgctggcaaatatggcggaaggaatgctactgcctccacctcat
tacaatgccgatgatgtcgtggatgtttatgcggacgtgccattatggag
tttttccatttag
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protein sequence of CBF5

>KC603713.1-CBF5.p1 ID=KC603713.1-CBF5.p1; Name=CBF5; organism=Malus x domestica; type=polypeptide; length=220bp
MDAFSHYYVDPQPESSSASDANSSRPMFMNLSDEEVLLASTYPKKQAGRK
KFKETRHPVYRGVRRRNSGKWVSEVREPNKKTRIWLGTFPTAEMAARAHD
VAAIALRGRSACLNFADSAWRLPVPASANAKDIQTAAAEAAEQFRPVEES
DEACGASAVAPSECTSAPEQQVHFMDEEAVFGMPGLLANMAEGMLLPPPH
YNADDVVDVYADVPLWSFSI
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mRNA from alignment at KC603713:1..663+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KC603713.1-CBF5.m1 ID=KC603713.1-CBF5.m1; Name=CBF5; organism=Malus x domestica; type=mRNA; length=663bp; location=Sequence derived from: KC603713:1..663+ (Malus x domestica
atggatgctttctctcattactacgtggacccgcagccggaatcgtcgtc
cgcttctgacgccaacagttctcgccccatgttcatgaacttgtcggacg
aggaggtcctgctggcgtccacttacccgaagaagcaggctggacggaag
aagtttaaagagacaaggcaccctgtgtaccgcggtgtccggaggaggaa
ctccggcaagtgggtgtccgaggtccgggagcccaacaaaaagacaagga
tttggctgggaacatttcccacagccgaaatggccgcgcgcgctcatgat
gtggcggccattgcgctgagggggaggtcggcttgcctcaactttgccga
ctctgcgtggcggctaccagtcccggcctccgccaacgcgaaggatattc
aaactgccgcggcggaagcagcagaacagtttcggccggtggaagagtcg
gatgaggcttgtggtgcttctgcggtggctccctcggagtgcacgtcagc
gccggagcaacaagtgcattttatggatgaggaagcggtttttgggatgc
cgggactgctggcaaatatggcggaaggaatgctactgcctccacctcat
tacaatgccgatgatgtcgtggatgtttatgcggacgtgccattatggag
tttttccatttag
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Coding sequence (CDS) from alignment at KC603713:1..663+

>KC603713.1-CBF5.m1 ID=KC603713.1-CBF5.m1; Name=CBF5; organism=Malus x domestica; type=CDS; length=663bp; location=Sequence derived from: KC603713:1..663+ (Malus x domestica
atggatgctttctctcattactacgtggacccgcagccggaatcgtcgtc
cgcttctgacgccaacagttctcgccccatgttcatgaacttgtcggacg
aggaggtcctgctggcgtccacttacccgaagaagcaggctggacggaag
aagtttaaagagacaaggcaccctgtgtaccgcggtgtccggaggaggaa
ctccggcaagtgggtgtccgaggtccgggagcccaacaaaaagacaagga
tttggctgggaacatttcccacagccgaaatggccgcgcgcgctcatgat
gtggcggccattgcgctgagggggaggtcggcttgcctcaactttgccga
ctctgcgtggcggctaccagtcccggcctccgccaacgcgaaggatattc
aaactgccgcggcggaagcagcagaacagtttcggccggtggaagagtcg
gatgaggcttgtggtgcttctgcggtggctccctcggagtgcacgtcagc
gccggagcaacaagtgcattttatggatgaggaagcggtttttgggatgc
cgggactgctggcaaatatggcggaaggaatgctactgcctccacctcat
tacaatgccgatgatgtcgtggatgtttatgcggacgtgccattatggag
tttttccatttag
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