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Transcript Overview
| Name | NPR1L |
|---|
| Unique Name | KC503838.1-NPR1L.m1 |
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| Type | mRNA |
|---|
| Organism | Malus x domestica (Apple) |
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| Source | genbank |
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| Product | NPR1-like protein |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KC503838.1-NPR1L.m1-cds1 | KC503838.1-NPR1L.m1-cds1 | Malus x domestica | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| NPR1L | KC503838.1-NPR1L.p1 | Malus x domestica | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| KC503838 |
region |
KC503838:778..2538+ |
NCBI Rosaceae gene and mRNA sequences |
| Chr10 |
chromosome |
Chr10:33315841..33318099+ |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
| chr10 |
chromosome |
chr10:24387288..24389546- |
Malus x domestica Whole Genome v1.0 Assembly & Annotation |
| chr10 |
chromosome |
chr10:28123819..28126077+ |
Malus x domestica Whole Genome v1.0p Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >KC503838.1-NPR1L.m1 ID=KC503838.1-NPR1L.m1; Name=NPR1L; organism=Malus x domestica; type=mRNA; length=1761bp
atggctcattcagccgaaccatcatcctctttgagctttacttcatcacc
ccatttatcaaatggttcaataagccacaacttatcgtgttctggctccg
aatcggtgccaagtcttgaagtcatgagtttgtccaagcttagctctagt
ttggagcagttgttgattgatcctggctgtgactatagtgatgctgatat
cgtagttgaggggattcctgttggtgtacaccgatgtatattggcgtcta
ggagtggattttttcgcgagctattcaagcgagaaaaggggtcttctgga
aaggaagacaggccaaagtactgtatgagtgattttctgccttatggcga
tgttggatatgaagccttcttggttttcttaagctatgtgtatactggaa
agcttaagccttctcccgtggaggtgtcaacctgcgttcacaatgtatgt
gcccatgacgcatgtagacctgctatcaatttcgttgtggaattgatgta
cgccgcttccattttccaaatgcccgatctggtttcgatattcgagcggc
gccttcttaattttgttgggaaagctctgtcagacaatgttgtcccaatt
ctcttggttgctttccattgtcagttgaatcagctcatcgatcagtgtgt
agatagagtggcacgatcagatattgatgacatctctcttgagaagggac
ttcctgatgaggttgtgaagaaaatcaaaattcttcgccgcaattatcag
caggattctgacccaaacttgccacctgccgatcccttgcatgaaaagag
aatccgaagaatacataaggctttggactcggatgatgtcgagcttgtga
aacttcttttaacggagtctaatataaccttagatgaagcaaatgctctc
cattatgctgcagcttactgcgatcctaaggttgtgaccgaagtgcttgc
tctgggcctcgctgatgttaacctccggaattctaggggttatacagtgc
ttcacattgctgtgatgcgcaaagagccatcaattattgtattgctactg
actaaaggagctcgtgcatcggagctgacatcagatggtcagagtgctgt
tagtatttgcaggaggttgacgagaccaaaggattaccattcaaaaacag
agcaggggcaagaagcaaacaaagaccgaatatgcattgatgttctagag
agggaaatgcggcggaatccaatggctggagatgcatctatatcttccca
aataatgcccgatgatctgcacatggagttgctgaacctggagaacagag
tggcattggcccgattgtttttccctgcggaagccaagctagccatggtc
attgcccatgcggagacatctgagtttgctgcgccatcatcatcgaaagg
atcaagtgggaatctgatggaggtagatttaaacgagacccccaccgtgc
agaacaaaagacttcattccaggttggaagcccttatgaaaacagtccgt
ttgggtagatgctacttccctcattgctcagaagtcctggataagttcat
cgatgacgacctccctcatttgttttacctcgagcctggctcctccgacg
agcagaaggtaaagaggaggcgtttcatggagctcaaggaggaagtacaa
aaagcatttgacaaggacaaggccgagtgtaacctctccggattgtcttc
atcgtcctccacgacatctccggaaaaaattggtgcaaatcagaaggtta
gggaaccgtga back to topprotein sequence of NPR1L >KC503838.1-NPR1L.p1 ID=KC503838.1-NPR1L.p1; Name=NPR1L; organism=Malus x domestica; type=polypeptide; length=586bp
MAHSAEPSSSLSFTSSPHLSNGSISHNLSCSGSESVPSLEVMSLSKLSSS
LEQLLIDPGCDYSDADIVVEGIPVGVHRCILASRSGFFRELFKREKGSSG
KEDRPKYCMSDFLPYGDVGYEAFLVFLSYVYTGKLKPSPVEVSTCVHNVC
AHDACRPAINFVVELMYAASIFQMPDLVSIFERRLLNFVGKALSDNVVPI
LLVAFHCQLNQLIDQCVDRVARSDIDDISLEKGLPDEVVKKIKILRRNYQ
QDSDPNLPPADPLHEKRIRRIHKALDSDDVELVKLLLTESNITLDEANAL
HYAAAYCDPKVVTEVLALGLADVNLRNSRGYTVLHIAVMRKEPSIIVLLL
TKGARASELTSDGQSAVSICRRLTRPKDYHSKTEQGQEANKDRICIDVLE
REMRRNPMAGDASISSQIMPDDLHMELLNLENRVALARLFFPAEAKLAMV
IAHAETSEFAAPSSSKGSSGNLMEVDLNETPTVQNKRLHSRLEALMKTVR
LGRCYFPHCSEVLDKFIDDDLPHLFYLEPGSSDEQKVKRRRFMELKEEVQ
KAFDKDKAECNLSGLSSSSSTTSPEKIGANQKVREP back to topmRNA from alignment at KC503838:778..2538+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >KC503838.1-NPR1L.m1 ID=KC503838.1-NPR1L.m1; Name=NPR1L; organism=Malus x domestica; type=mRNA; length=1761bp; location=Sequence derived from: KC503838:778..2538+ (Malus x domestica
atggctcattcagccgaaccatcatcctctttgagctttacttcatcacc
ccatttatcaaatggttcaataagccacaacttatcgtgttctggctccg
aatcggtgccaagtcttgaagtcatgagtttgtccaagcttagctctagt
ttggagcagttgttgattgatcctggctgtgactatagtgatgctgatat
cgtagttgaggggattcctgttggtgtacaccgatgtatattggcgtcta
ggagtggattttttcgcgagctattcaagcgagaaaaggggtcttctgga
aaggaagacaggccaaagtactgtatgagtgattttctgccttatggcga
tgttggatatgaagccttcttggttttcttaagctatgtgtatactggaa
agcttaagccttctcccgtggaggtgtcaacctgcgttcacaatgtatgt
gcccatgacgcatgtagacctgctatcaatttcgttgtggaattgatgta
cgccgcttccattttccaaatgcccgatctggtttcgatattcgagcggc
gccttcttaattttgttgggaaagctctgtcagacaatgttgtcccaatt
ctcttggttgctttccattgtcagttgaatcagctcatcgatcagtgtgt
agatagagtggcacgatcagatattgatgacatctctcttgagaagggac
ttcctgatgaggttgtgaagaaaatcaaaattcttcgccgcaattatcag
caggattctgacccaaacttgccacctgccgatcccttgcatgaaaagag
aatccgaagaatacataaggctttggactcggatgatgtcgagcttgtga
aacttcttttaacggagtctaatataaccttagatgaagcaaatgctctc
cattatgctgcagcttactgcgatcctaaggttgtgaccgaagtgcttgc
tctgggcctcgctgatgttaacctccggaattctaggggttatacagtgc
ttcacattgctgtgatgcgcaaagagccatcaattattgtattgctactg
actaaaggagctcgtgcatcggagctgacatcagatggtcagagtgctgt
tagtatttgcaggaggttgacgagaccaaaggattaccattcaaaaacag
agcaggggcaagaagcaaacaaagaccgaatatgcattgatgttctagag
agggaaatgcggcggaatccaatggctggagatgcatctatatcttccca
aataatgcccgatgatctgcacatggagttgctgaacctggagaacagag
tggcattggcccgattgtttttccctgcggaagccaagctagccatggtc
attgcccatgcggagacatctgagtttgctgcgccatcatcatcgaaagg
atcaagtgggaatctgatggaggtagatttaaacgagacccccaccgtgc
agaacaaaagacttcattccaggttggaagcccttatgaaaacagtccgt
ttgggtagatgctacttccctcattgctcagaagtcctggataagttcat
cgatgacgacctccctcatttgttttacctcgagcctggctcctccgacg
agcagaaggtaaagaggaggcgtttcatggagctcaaggaggaagtacaa
aaagcatttgacaaggacaaggccgagtgtaacctctccggattgtcttc
atcgtcctccacgacatctccggaaaaaattggtgcaaatcagaaggtta
gggaaccgtga back to topCoding sequence (CDS) from alignment at KC503838:778..2538+ >KC503838.1-NPR1L.m1 ID=KC503838.1-NPR1L.m1; Name=NPR1L; organism=Malus x domestica; type=CDS; length=1761bp; location=Sequence derived from: KC503838:778..2538+ (Malus x domestica
atggctcattcagccgaaccatcatcctctttgagctttacttcatcacc
ccatttatcaaatggttcaataagccacaacttatcgtgttctggctccg
aatcggtgccaagtcttgaagtcatgagtttgtccaagcttagctctagt
ttggagcagttgttgattgatcctggctgtgactatagtgatgctgatat
cgtagttgaggggattcctgttggtgtacaccgatgtatattggcgtcta
ggagtggattttttcgcgagctattcaagcgagaaaaggggtcttctgga
aaggaagacaggccaaagtactgtatgagtgattttctgccttatggcga
tgttggatatgaagccttcttggttttcttaagctatgtgtatactggaa
agcttaagccttctcccgtggaggtgtcaacctgcgttcacaatgtatgt
gcccatgacgcatgtagacctgctatcaatttcgttgtggaattgatgta
cgccgcttccattttccaaatgcccgatctggtttcgatattcgagcggc
gccttcttaattttgttgggaaagctctgtcagacaatgttgtcccaatt
ctcttggttgctttccattgtcagttgaatcagctcatcgatcagtgtgt
agatagagtggcacgatcagatattgatgacatctctcttgagaagggac
ttcctgatgaggttgtgaagaaaatcaaaattcttcgccgcaattatcag
caggattctgacccaaacttgccacctgccgatcccttgcatgaaaagag
aatccgaagaatacataaggctttggactcggatgatgtcgagcttgtga
aacttcttttaacggagtctaatataaccttagatgaagcaaatgctctc
cattatgctgcagcttactgcgatcctaaggttgtgaccgaagtgcttgc
tctgggcctcgctgatgttaacctccggaattctaggggttatacagtgc
ttcacattgctgtgatgcgcaaagagccatcaattattgtattgctactg
actaaaggagctcgtgcatcggagctgacatcagatggtcagagtgctgt
tagtatttgcaggaggttgacgagaccaaaggattaccattcaaaaacag
agcaggggcaagaagcaaacaaagaccgaatatgcattgatgttctagag
agggaaatgcggcggaatccaatggctggagatgcatctatatcttccca
aataatgcccgatgatctgcacatggagttgctgaacctggagaacagag
tggcattggcccgattgtttttccctgcggaagccaagctagccatggtc
attgcccatgcggagacatctgagtttgctgcgccatcatcatcgaaagg
atcaagtgggaatctgatggaggtagatttaaacgagacccccaccgtgc
agaacaaaagacttcattccaggttggaagcccttatgaaaacagtccgt
ttgggtagatgctacttccctcattgctcagaagtcctggataagttcat
cgatgacgacctccctcatttgttttacctcgagcctggctcctccgacg
agcagaaggtaaagaggaggcgtttcatggagctcaaggaggaagtacaa
aaagcatttgacaaggacaaggccgagtgtaacctctccggattgtcttc
atcgtcctccacgacatctccggaaaaaattggtgcaaatcagaaggtta
gggaaccgtga back to top
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