POD, JQ325052.1-POD.m1 (mRNA) Pyrus x bretschneideri

Transcript Overview


Name	POD
Unique Name	JQ325052.1-POD.m1
Type	mRNA
Organism	Pyrus x bretschneideri ()
Source	genbank
Product	peroxidase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JQ325052.1-POD.m1-cds1	JQ325052.1-POD.m1-cds1	Pyrus x bretschneideri	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
POD	JQ325052.1-POD.p1	Pyrus x bretschneideri	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	400071332
nuccore	JQ325052.1

Alignments

Feature Name	Type	Location	Analysis
JQ325052	region	JQ325052:73..1083+	NCBI Rosaceae gene and mRNA sequences
scaffold01988	supercontig	scaffold01988:15713..17596-	Pyrus communis Genome v1.0 Draft Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JQ325052:73..1083+
coding sequence from alignment at JQ325052:73..1083+

mRNA sequence

>JQ325052.1-POD.m1 ID=JQ325052.1-POD.m1; Name=POD; organism=Pyrus x bretschneideri; type=mRNA; length=1011bp
atggcttcttcttcttcttccagagctctcttgttcttctttgctttgct
ttctctctcagcagtttcttgctttgctgctgagagaaatgaggaggacc
cagtccttgtcatggacttctatagggacacatgtcctcaggctgaagag
gtcatcagagaacaagtcaagcttctctacaagcgccacaagaacaccgc
cttctcttggctcaggaacatctttcacgactgtgctgtccagtcatgtg
atgcatctctgctgctggactcaacaaggagatcattgtctgagaaggag
atggacagaagctttgggatgagaaactttaggtacattgaagagattaa
agaagctttggagagagagtgccctggtgttgtttcctgctcagatattc
tcgtcttgtctgccagagagggtgttgttaggcttggaggcccattcatt
cctcttaaaactggaagaagagatggaaggagaagcagagctgaaatcct
tgagcaataccttcctgaccacaatgagagcatgtccgttgtccttgaga
agtttgctgacatgggcattgacacccccggtttggttgcccttctagga
gctcacagtgttggaagaacacattgtgtgaagctggtgcaccggttgta
cccagaagttgaccctcagctcaaccctgaccatgtccctcacatgctca
agaagtgccctgatgcaatccccgaccccaaagccgttcaatacgtgaga
aatgaccgtggtacccccatgatcttcgatactaactactacagaaacat
cttggacaacaagggtttgatgatggtggatcaccagctagccacagaca
agaggacaaaaccctacgtcaagaaaatggccaagagccaagactacttc
ttcaaggagttttcgagagccttcaccattctctccgagaacaaccctct
caccggaaacaagggcgagatccgacagcagcgcaatgttgccaataaaa
tccgggactag

protein sequence of POD

>JQ325052.1-POD.p1 ID=JQ325052.1-POD.p1; Name=POD; organism=Pyrus x bretschneideri; type=polypeptide; length=336bp
MASSSSSRALLFFFALLSLSAVSCFAAERNEEDPVLVMDFYRDTCPQAEE
VIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKE
MDRSFGMRNFRYIEEIKEALERECPGVVSCSDILVLSAREGVVRLGGPFI
PLKTGRRDGRRSRAEILEQYLPDHNESMSVVLEKFADMGIDTPGLVALLG
AHSVGRTHCVKLVHRLYPEVDPQLNPDHVPHMLKKCPDAIPDPKAVQYVR
NDRGTPMIFDTNYYRNILDNKGLMMVDHQLATDKRTKPYVKKMAKSQDYF
FKEFSRAFTILSENNPLTGNKGEIRQQRNVANKIRD

mRNA from alignment at JQ325052:73..1083+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JQ325052.1-POD.m1 ID=JQ325052.1-POD.m1; Name=POD; organism=Pyrus x bretschneideri; type=mRNA; length=1011bp; location=Sequence derived from: JQ325052:73..1083+ (Pyrus x bretschneideri
atggcttcttcttcttcttccagagctctcttgttcttctttgctttgct
ttctctctcagcagtttcttgctttgctgctgagagaaatgaggaggacc
cagtccttgtcatggacttctatagggacacatgtcctcaggctgaagag
gtcatcagagaacaagtcaagcttctctacaagcgccacaagaacaccgc
cttctcttggctcaggaacatctttcacgactgtgctgtccagtcatgtg
atgcatctctgctgctggactcaacaaggagatcattgtctgagaaggag
atggacagaagctttgggatgagaaactttaggtacattgaagagattaa
agaagctttggagagagagtgccctggtgttgtttcctgctcagatattc
tcgtcttgtctgccagagagggtgttgttaggcttggaggcccattcatt
cctcttaaaactggaagaagagatggaaggagaagcagagctgaaatcct
tgagcaataccttcctgaccacaatgagagcatgtccgttgtccttgaga
agtttgctgacatgggcattgacacccccggtttggttgcccttctagga
gctcacagtgttggaagaacacattgtgtgaagctggtgcaccggttgta
cccagaagttgaccctcagctcaaccctgaccatgtccctcacatgctca
agaagtgccctgatgcaatccccgaccccaaagccgttcaatacgtgaga
aatgaccgtggtacccccatgatcttcgatactaactactacagaaacat
cttggacaacaagggtttgatgatggtggatcaccagctagccacagaca
agaggacaaaaccctacgtcaagaaaatggccaagagccaagactacttc
ttcaaggagttttcgagagccttcaccattctctccgagaacaaccctct
caccggaaacaagggcgagatccgacagcagcgcaatgttgccaataaaa
tccgggactag

Coding sequence (CDS) from alignment at JQ325052:73..1083+

>JQ325052.1-POD.m1 ID=JQ325052.1-POD.m1; Name=POD; organism=Pyrus x bretschneideri; type=CDS; length=1011bp; location=Sequence derived from: JQ325052:73..1083+ (Pyrus x bretschneideri
atggcttcttcttcttcttccagagctctcttgttcttctttgctttgct
ttctctctcagcagtttcttgctttgctgctgagagaaatgaggaggacc
cagtccttgtcatggacttctatagggacacatgtcctcaggctgaagag
gtcatcagagaacaagtcaagcttctctacaagcgccacaagaacaccgc
cttctcttggctcaggaacatctttcacgactgtgctgtccagtcatgtg
atgcatctctgctgctggactcaacaaggagatcattgtctgagaaggag
atggacagaagctttgggatgagaaactttaggtacattgaagagattaa
agaagctttggagagagagtgccctggtgttgtttcctgctcagatattc
tcgtcttgtctgccagagagggtgttgttaggcttggaggcccattcatt
cctcttaaaactggaagaagagatggaaggagaagcagagctgaaatcct
tgagcaataccttcctgaccacaatgagagcatgtccgttgtccttgaga
agtttgctgacatgggcattgacacccccggtttggttgcccttctagga
gctcacagtgttggaagaacacattgtgtgaagctggtgcaccggttgta
cccagaagttgaccctcagctcaaccctgaccatgtccctcacatgctca
agaagtgccctgatgcaatccccgaccccaaagccgttcaatacgtgaga
aatgaccgtggtacccccatgatcttcgatactaactactacagaaacat
cttggacaacaagggtttgatgatggtggatcaccagctagccacagaca
agaggacaaaaccctacgtcaagaaaatggccaagagccaagactacttc
ttcaaggagttttcgagagccttcaccattctctccgagaacaaccctct
caccggaaacaagggcgagatccgacagcagcgcaatgttgccaataaaa
tccgggactag