BIS1, JQ582625.1-BIS1.m1 (mRNA) Malus x domestica

Transcript Overview
NameBIS1
Unique NameJQ582625.1-BIS1.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductBIS1 biphenyl synthase
Genbank Notetype III polyketide synthase; biphenyl product
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JQ582625.1-BIS1.m1-cds1JQ582625.1-BIS1.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
BIS1JQ582625.1-BIS1.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI421953224
nuccoreJQ582625.1
Alignments
Feature NameTypeLocationAnalysis
JQ582625 region JQ582625:1..1173+ NCBI Rosaceae gene and mRNA sequences
Chr15 chromosome Chr15:9566796..9568362- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr15 chromosome chr15:6471736..6473302+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr15 chromosome chr15:6509902..6511468- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>JQ582625.1-BIS1.m1 ID=JQ582625.1-BIS1.m1; Name=BIS1; organism=Malus x domestica; type=mRNA; length=1173bp
atggcgcctttggttaagaatcatggagagcatcaacatgccaaaatcct
agccattggcactgcaaatccaccaaacgtctactaccaaaaagactatc
ctgatttcttgtttcgagtcacaaaaaatgagcacagaacagatttaaga
gagaagtttgatcgcatttgtgagaaatcaagaacaagaaaacgttactt
gcatctaacagaggagattctgaaggctaacccaagcatatatacctatg
gtgccccatcactcgatgtgcgccaagacatgttgaaccctgaggtccca
aagctagggcaacaagcagcactgaaagccatcaaagagtggggccaacc
catctcaaagatcacccacctcatcttttgcacagcttcctgtgttgaca
tgccaggtgccgacttccaattggtcaagctcctcggtcttaacccatct
gtcactagaaccatgatctacgaagctggttgctatgctggtgcaactgt
cctccgcctagccaaggacttcgcagagaacaacgagggtgcacgggtcc
ttgtggtgtgcgctgagatcacgaccgtattcttccacggactcactgac
acccacttggacatactggtgggccaggctctttttgctgacggagcatc
tgctgtgatagttggggccaatccagagcctaaaattgagaggccactgt
ttgaaatcgtggcatgcaggcagacaatcatacctaactcagagcatggt
gtggtggccaacattcgtgaaatggggtttacttattatttatcaggaga
agtccccaaatttgttggtggaaatgttgtggattttctaactaaaactt
ttgaaaaagttgacggaaagaataaggactggaactccttgttttttagt
gtgcatcctggtggacccgccattgtagaccaggtggaggagcaattggg
tttgaaggaagggaagcttagggcaacaaggcatgtgttgagtgagtatg
gcaacatgggagctccatctgtgcactttattttggatgatatgagaaag
aagtcgattgaggaaggcaaatccacaactggtgaaggtttggaatgggg
tgtcgtgattggaatcggaccaggactcactgttgagacagccgtactac
gcagtgaatctattacatgctaa
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protein sequence of BIS1

>JQ582625.1-BIS1.p1 ID=JQ582625.1-BIS1.p1; Name=BIS1; organism=Malus x domestica; type=polypeptide; length=390bp
MAPLVKNHGEHQHAKILAIGTANPPNVYYQKDYPDFLFRVTKNEHRTDLR
EKFDRICEKSRTRKRYLHLTEEILKANPSIYTYGAPSLDVRQDMLNPEVP
KLGQQAALKAIKEWGQPISKITHLIFCTASCVDMPGADFQLVKLLGLNPS
VTRTMIYEAGCYAGATVLRLAKDFAENNEGARVLVVCAEITTVFFHGLTD
THLDILVGQALFADGASAVIVGANPEPKIERPLFEIVACRQTIIPNSEHG
VVANIREMGFTYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFS
VHPGGPAIVDQVEEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDDMRK
KSIEEGKSTTGEGLEWGVVIGIGPGLTVETAVLRSESITC
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mRNA from alignment at JQ582625:1..1173+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JQ582625.1-BIS1.m1 ID=JQ582625.1-BIS1.m1; Name=BIS1; organism=Malus x domestica; type=mRNA; length=1173bp; location=Sequence derived from: JQ582625:1..1173+ (Malus x domestica
atggcgcctttggttaagaatcatggagagcatcaacatgccaaaatcct
agccattggcactgcaaatccaccaaacgtctactaccaaaaagactatc
ctgatttcttgtttcgagtcacaaaaaatgagcacagaacagatttaaga
gagaagtttgatcgcatttgtgagaaatcaagaacaagaaaacgttactt
gcatctaacagaggagattctgaaggctaacccaagcatatatacctatg
gtgccccatcactcgatgtgcgccaagacatgttgaaccctgaggtccca
aagctagggcaacaagcagcactgaaagccatcaaagagtggggccaacc
catctcaaagatcacccacctcatcttttgcacagcttcctgtgttgaca
tgccaggtgccgacttccaattggtcaagctcctcggtcttaacccatct
gtcactagaaccatgatctacgaagctggttgctatgctggtgcaactgt
cctccgcctagccaaggacttcgcagagaacaacgagggtgcacgggtcc
ttgtggtgtgcgctgagatcacgaccgtattcttccacggactcactgac
acccacttggacatactggtgggccaggctctttttgctgacggagcatc
tgctgtgatagttggggccaatccagagcctaaaattgagaggccactgt
ttgaaatcgtggcatgcaggcagacaatcatacctaactcagagcatggt
gtggtggccaacattcgtgaaatggggtttacttattatttatcaggaga
agtccccaaatttgttggtggaaatgttgtggattttctaactaaaactt
ttgaaaaagttgacggaaagaataaggactggaactccttgttttttagt
gtgcatcctggtggacccgccattgtagaccaggtggaggagcaattggg
tttgaaggaagggaagcttagggcaacaaggcatgtgttgagtgagtatg
gcaacatgggagctccatctgtgcactttattttggatgatatgagaaag
aagtcgattgaggaaggcaaatccacaactggtgaaggtttggaatgggg
tgtcgtgattggaatcggaccaggactcactgttgagacagccgtactac
gcagtgaatctattacatgctaa
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Coding sequence (CDS) from alignment at JQ582625:1..1173+

>JQ582625.1-BIS1.m1 ID=JQ582625.1-BIS1.m1; Name=BIS1; organism=Malus x domestica; type=CDS; length=1173bp; location=Sequence derived from: JQ582625:1..1173+ (Malus x domestica
atggcgcctttggttaagaatcatggagagcatcaacatgccaaaatcct
agccattggcactgcaaatccaccaaacgtctactaccaaaaagactatc
ctgatttcttgtttcgagtcacaaaaaatgagcacagaacagatttaaga
gagaagtttgatcgcatttgtgagaaatcaagaacaagaaaacgttactt
gcatctaacagaggagattctgaaggctaacccaagcatatatacctatg
gtgccccatcactcgatgtgcgccaagacatgttgaaccctgaggtccca
aagctagggcaacaagcagcactgaaagccatcaaagagtggggccaacc
catctcaaagatcacccacctcatcttttgcacagcttcctgtgttgaca
tgccaggtgccgacttccaattggtcaagctcctcggtcttaacccatct
gtcactagaaccatgatctacgaagctggttgctatgctggtgcaactgt
cctccgcctagccaaggacttcgcagagaacaacgagggtgcacgggtcc
ttgtggtgtgcgctgagatcacgaccgtattcttccacggactcactgac
acccacttggacatactggtgggccaggctctttttgctgacggagcatc
tgctgtgatagttggggccaatccagagcctaaaattgagaggccactgt
ttgaaatcgtggcatgcaggcagacaatcatacctaactcagagcatggt
gtggtggccaacattcgtgaaatggggtttacttattatttatcaggaga
agtccccaaatttgttggtggaaatgttgtggattttctaactaaaactt
ttgaaaaagttgacggaaagaataaggactggaactccttgttttttagt
gtgcatcctggtggacccgccattgtagaccaggtggaggagcaattggg
tttgaaggaagggaagcttagggcaacaaggcatgtgttgagtgagtatg
gcaacatgggagctccatctgtgcactttattttggatgatatgagaaag
aagtcgattgaggaaggcaaatccacaactggtgaaggtttggaatgggg
tgtcgtgattggaatcggaccaggactcactgttgagacagccgtactac
gcagtgaatctattacatgctaa
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