SUT1, JX013937.1-SUT1.m1 (mRNA) Fragaria x ananassa

Transcript Overview


Name	SUT1
Unique Name	JX013937.1-SUT1.m1
Type	mRNA
Organism	Fragaria x ananassa (Strawberry)
Source	genbank
Product	sucrose transporter 1

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
JX013937.1-SUT1.m1-cds1	JX013937.1-SUT1.m1-cds1	Fragaria x ananassa	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
SUT1	JX013937.1-SUT1.p1	Fragaria x ananassa	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	408384444
nuccore	JX013937.1

Alignments

Feature Name	Type	Location	Analysis
JX013937	region	JX013937:1..1821+	NCBI Rosaceae gene and mRNA sequences
LG5	chromosome	LG5:22504838..22512262-	Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at JX013937:1..1821+
coding sequence from alignment at JX013937:1..1821+

mRNA sequence

>JX013937.1-SUT1.m1 ID=JX013937.1-SUT1.m1; Name=SUT1; organism=Fragaria x ananassa; type=mRNA; length=1821bp
atgggaccgaattcgttttgtcctccggagagagagaaagcggcctcgcc
ggagatgcctacgccagaagcggacccggagcgccaccaccaccaccgcg
ggaggactaccagacctccggcggcggtggttcgcccggcgaggccgtcg
ctccggcaacttttccgggtggcgtcggttgcttgcggaatccaattcgg
ctgggctttgcagctctctctgctcactccctatgttcaagagctcggaa
tccctcacgcttgggccagcgtcatctggctgtgtgggccgttgtccggt
ctgatagtccagcccatggttggacacatgagcgatcggagcacgagccg
gtttgggcggcggaggccgttcatcgtcgccggagcggcgtgtattgctg
tttcggttctgatcatcggttactccgccgatatcgggtggctgctcggc
gaccgcggcggcgtgaggcctagggctattggagtgtttgtgtttgggtt
ttggattttggatgtggccaataatgtgacccaggggccttgtagagctc
tgcttgctgatctcactggaaaggaccatcgaagaactcgagtcgcaaat
gcttatttctctttgtttatggcggttggcaatattcttggctatgcaac
tggagcattcagttactggtacaaggttttcccgtttacacttacatccg
catgcgatgttaactgtgcaaatctcaagtctgcattcattattgacata
gcattcatcgcacttacaacatatttgagcacatcagcagctcaggaatt
acctctgggttcaagcgacagaaataccccttttgctgatgaagagccag
ggcattccagccaagctgaagaagctttcctctgggagctgtttgggact
ttcagatatttctcagcgtctatatggttaatcctacttgttactggtct
aaactggattgggtggtttccatttcttctgtttgatactgattggatgg
gtcgagaaatttatggtggcgagccaaatgaagggagaaattacagtgat
ggggttcgaatgggagcttttggtttgatgttgaactcgattatgcttgg
tgcaacctcgttgcttatggagaggctttgcaggaaatggggatctggtt
ttgtgtgggggatttcaaactttatcatggctctttcctttcttgcaatg
cttgttattacatttgtgaacaagagtattggccatgattcacctccact
tgggattgtgatagcttcactggttgtttttacaattcttggaattccat
tggcgatcacgtacagtgttccatatgccttgatttcttctcgtatcgag
tctttgggacttggccaaggcttatcaatgggtgtactgaatctggcaat
cgttgtaccacaggttctgtgcattggttatctatatgcatatcttccgc
cgaattccagttttccagtgagatcacccaaaacttcaaacaacatcgat
ctcgccgaaaatctggaattaggcggactcgccgggagggaaagtggtcg
gggacgctgcgagtccattggggtggagccctcgccggcgccggacggtg
gagaacggagggacatccgcactttaagtcgagtgcggacgttcgttctc
gaacggctccgtgtgctggtatccctgggaagtggaccatgggatcagct
atttggtggtggaaactctccagcctttgcggttgcagcagttgcagcct
tagcaagtgggctggtggccatcttggctattccacgttctattccgcag
aagcctagatctttcacatga

protein sequence of SUT1

>JX013937.1-SUT1.p1 ID=JX013937.1-SUT1.p1; Name=SUT1; organism=Fragaria x ananassa; type=polypeptide; length=606bp
MGPNSFCPPEREKAASPEMPTPEADPERHHHHRGRTTRPPAAVVRPARPS
LRQLFRVASVACGIQFGWALQLSLLTPYVQELGIPHAWASVIWLCGPLSG
LIVQPMVGHMSDRSTSRFGRRRPFIVAGAACIAVSVLIIGYSADIGWLLG
DRGGVRPRAIGVFVFGFWILDVANNVTQGPCRALLADLTGKDHRRTRVAN
AYFSLFMAVGNILGYATGAFSYWYKVFPFTLTSACDVNCANLKSAFIIDI
AFIALTTYLSTSAAQELPLGSSDRNTPFADEEPGHSSQAEEAFLWELFGT
FRYFSASIWLILLVTGLNWIGWFPFLLFDTDWMGREIYGGEPNEGRNYSD
GVRMGAFGLMLNSIMLGATSLLMERLCRKWGSGFVWGISNFIMALSFLAM
LVITFVNKSIGHDSPPLGIVIASLVVFTILGIPLAITYSVPYALISSRIE
SLGLGQGLSMGVLNLAIVVPQVLCIGYLYAYLPPNSSFPVRSPKTSNNID
LAENLELGGLAGRESGRGRCESIGVEPSPAPDGGERRDIRTLSRVRTFVL
ERLRVLVSLGSGPWDQLFGGGNSPAFAVAAVAALASGLVAILAIPRSIPQ
KPRSFT

mRNA from alignment at JX013937:1..1821+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>JX013937.1-SUT1.m1 ID=JX013937.1-SUT1.m1; Name=SUT1; organism=Fragaria x ananassa; type=mRNA; length=1821bp; location=Sequence derived from: JX013937:1..1821+ (Fragaria x ananassa
atgggaccgaattcgttttgtcctccggagagagagaaagcggcctcgcc
ggagatgcctacgccagaagcggacccggagcgccaccaccaccaccgcg
ggaggactaccagacctccggcggcggtggttcgcccggcgaggccgtcg
ctccggcaacttttccgggtggcgtcggttgcttgcggaatccaattcgg
ctgggctttgcagctctctctgctcactccctatgttcaagagctcggaa
tccctcacgcttgggccagcgtcatctggctgtgtgggccgttgtccggt
ctgatagtccagcccatggttggacacatgagcgatcggagcacgagccg
gtttgggcggcggaggccgttcatcgtcgccggagcggcgtgtattgctg
tttcggttctgatcatcggttactccgccgatatcgggtggctgctcggc
gaccgcggcggcgtgaggcctagggctattggagtgtttgtgtttgggtt
ttggattttggatgtggccaataatgtgacccaggggccttgtagagctc
tgcttgctgatctcactggaaaggaccatcgaagaactcgagtcgcaaat
gcttatttctctttgtttatggcggttggcaatattcttggctatgcaac
tggagcattcagttactggtacaaggttttcccgtttacacttacatccg
catgcgatgttaactgtgcaaatctcaagtctgcattcattattgacata
gcattcatcgcacttacaacatatttgagcacatcagcagctcaggaatt
acctctgggttcaagcgacagaaataccccttttgctgatgaagagccag
ggcattccagccaagctgaagaagctttcctctgggagctgtttgggact
ttcagatatttctcagcgtctatatggttaatcctacttgttactggtct
aaactggattgggtggtttccatttcttctgtttgatactgattggatgg
gtcgagaaatttatggtggcgagccaaatgaagggagaaattacagtgat
ggggttcgaatgggagcttttggtttgatgttgaactcgattatgcttgg
tgcaacctcgttgcttatggagaggctttgcaggaaatggggatctggtt
ttgtgtgggggatttcaaactttatcatggctctttcctttcttgcaatg
cttgttattacatttgtgaacaagagtattggccatgattcacctccact
tgggattgtgatagcttcactggttgtttttacaattcttggaattccat
tggcgatcacgtacagtgttccatatgccttgatttcttctcgtatcgag
tctttgggacttggccaaggcttatcaatgggtgtactgaatctggcaat
cgttgtaccacaggttctgtgcattggttatctatatgcatatcttccgc
cgaattccagttttccagtgagatcacccaaaacttcaaacaacatcgat
ctcgccgaaaatctggaattaggcggactcgccgggagggaaagtggtcg
gggacgctgcgagtccattggggtggagccctcgccggcgccggacggtg
gagaacggagggacatccgcactttaagtcgagtgcggacgttcgttctc
gaacggctccgtgtgctggtatccctgggaagtggaccatgggatcagct
atttggtggtggaaactctccagcctttgcggttgcagcagttgcagcct
tagcaagtgggctggtggccatcttggctattccacgttctattccgcag
aagcctagatctttcacatga

Coding sequence (CDS) from alignment at JX013937:1..1821+

>JX013937.1-SUT1.m1 ID=JX013937.1-SUT1.m1; Name=SUT1; organism=Fragaria x ananassa; type=CDS; length=1821bp; location=Sequence derived from: JX013937:1..1821+ (Fragaria x ananassa
atgggaccgaattcgttttgtcctccggagagagagaaagcggcctcgcc
ggagatgcctacgccagaagcggacccggagcgccaccaccaccaccgcg
ggaggactaccagacctccggcggcggtggttcgcccggcgaggccgtcg
ctccggcaacttttccgggtggcgtcggttgcttgcggaatccaattcgg
ctgggctttgcagctctctctgctcactccctatgttcaagagctcggaa
tccctcacgcttgggccagcgtcatctggctgtgtgggccgttgtccggt
ctgatagtccagcccatggttggacacatgagcgatcggagcacgagccg
gtttgggcggcggaggccgttcatcgtcgccggagcggcgtgtattgctg
tttcggttctgatcatcggttactccgccgatatcgggtggctgctcggc
gaccgcggcggcgtgaggcctagggctattggagtgtttgtgtttgggtt
ttggattttggatgtggccaataatgtgacccaggggccttgtagagctc
tgcttgctgatctcactggaaaggaccatcgaagaactcgagtcgcaaat
gcttatttctctttgtttatggcggttggcaatattcttggctatgcaac
tggagcattcagttactggtacaaggttttcccgtttacacttacatccg
catgcgatgttaactgtgcaaatctcaagtctgcattcattattgacata
gcattcatcgcacttacaacatatttgagcacatcagcagctcaggaatt
acctctgggttcaagcgacagaaataccccttttgctgatgaagagccag
ggcattccagccaagctgaagaagctttcctctgggagctgtttgggact
ttcagatatttctcagcgtctatatggttaatcctacttgttactggtct
aaactggattgggtggtttccatttcttctgtttgatactgattggatgg
gtcgagaaatttatggtggcgagccaaatgaagggagaaattacagtgat
ggggttcgaatgggagcttttggtttgatgttgaactcgattatgcttgg
tgcaacctcgttgcttatggagaggctttgcaggaaatggggatctggtt
ttgtgtgggggatttcaaactttatcatggctctttcctttcttgcaatg
cttgttattacatttgtgaacaagagtattggccatgattcacctccact
tgggattgtgatagcttcactggttgtttttacaattcttggaattccat
tggcgatcacgtacagtgttccatatgccttgatttcttctcgtatcgag
tctttgggacttggccaaggcttatcaatgggtgtactgaatctggcaat
cgttgtaccacaggttctgtgcattggttatctatatgcatatcttccgc
cgaattccagttttccagtgagatcacccaaaacttcaaacaacatcgat
ctcgccgaaaatctggaattaggcggactcgccgggagggaaagtggtcg
gggacgctgcgagtccattggggtggagccctcgccggcgccggacggtg
gagaacggagggacatccgcactttaagtcgagtgcggacgttcgttctc
gaacggctccgtgtgctggtatccctgggaagtggaccatgggatcagct
atttggtggtggaaactctccagcctttgcggttgcagcagttgcagcct
tagcaagtgggctggtggccatcttggctattccacgttctattccgcag
aagcctagatctttcacatga