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Transcript Overview
| Name | AMT1.2 |
|---|
| Unique Name | JN650605.1-AMT1.2.m1 |
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| Type | mRNA |
|---|
| Organism | Pyrus calleryana () |
|---|
| Source | genbank |
|---|
| Product | AMT1;2 |
|---|
| Genbank Note | ammonium transporter |
|---|
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| JN650605.1-AMT1.2.m1-cds1 | JN650605.1-AMT1.2.m1-cds1 | Pyrus calleryana | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| AMT1.2 | JN650605.1-AMT1.2.p1 | Pyrus calleryana | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| JN650605 |
region |
JN650605:1..1515+ |
NCBI Rosaceae gene and mRNA sequences |
| scaffold03302 |
supercontig |
scaffold03302:11100..12614+ |
Pyrus communis Genome v1.0 Draft Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >JN650605.1-AMT1.2.m1 ID=JN650605.1-AMT1.2.m1; Name=AMT1.2; organism=Pyrus calleryana; type=mRNA; length=1515bp
atggccactctgacctgcacagcctccgacttagccccacttctcaccac
cgccaccaccgccctcaatgccacagctctctccgaattcctctgcggcc
gctttaacacaatctccaccaaattcgctgaaaccacttacgcagtcgac
aacacttacctcctcttctccgcctaccttgtcttcgccatgcagctcgg
cttcgccatgctatgcgccggctccgttcgtgccaagaacaccatgaata
tcatgctcaccaacgtccttgatgccgctgccggtgccctctcctattac
ctcttcggctttgcctttgccttcggcgctccctccaacgccttcatcgg
ccgacacttcttcggcctccgagacttcccctctgtatccggaggagact
acagcttcttcctttaccaatgggcttttgccatagccgccgctggcatc
accagcggctctatcgctgagagaacgcaattcgtcgcttacctcattta
ctcttctttcctaaccggttttgtctacccggtcgtgtctcattggtttt
ggtccgctgacggatgggccagtccaacccggtccgataacttactattt
ggctccggttcaattgattttgccggttcgggtgtggtccacatggttgg
aggcatagccggtttatggggcgccgtgatcgaaagcccgagaattggca
gatttgatcgaaccggccgatctgtggccttgcggggtcacagcgcatcc
ctagtcgttctcggtacgttcttgctttggttcgggtggtacgggttcaa
ccccggttcatttctcacgattttgaagagttacggcgatggtggtactt
attacggtcaatggagcgccattggtaggacagctgtcacaacgacattg
gctggctgcacagccgctctcactacgttgttcagcaagcgattactggt
gggtcattggaacgtgctcgacgtttgtaacggtctgttgggtggttttg
ccgcgatcacctccgggtgctcggtggtggaaccgtgggcggcaatcgtg
tgcgggttcgtggccgcatgggttttgataggatgcaacaaggtggcgga
gaagctaaaatacgatgatccattggaggctgcccagttgcatggtggat
gtggagcttgggggctgatattcacagggttgtttgcaacagaaaaatat
gtgaatgaggtgtactccggcaggtcagggcgcccgtatgggttgtttat
gggtggtggtgggaggctgttggcggcgcaaattgtgcagattttggtgg
tggcagggtgggtcagtgctaccatgggcccgctgttctatgggcttcat
aagttgaagttattgaggatctcaagggaggatgagactcaagggatgga
tatgacaaggcatggtggatttgcttatgtttaccatgatgaagatgatc
cgtccattaaacctgagtttatgatgcggagggttgagcctgttaatgat
gccagtcctgcataa back to topprotein sequence of AMT1.2 >JN650605.1-AMT1.2.p1 ID=JN650605.1-AMT1.2.p1; Name=AMT1.2; organism=Pyrus calleryana; type=polypeptide; length=504bp
MATLTCTASDLAPLLTTATTALNATALSEFLCGRFNTISTKFAETTYAVD
NTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALSYY
LFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLYQWAFAIAAAGI
TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRSDNLLF
GSGSIDFAGSGVVHMVGGIAGLWGAVIESPRIGRFDRTGRSVALRGHSAS
LVVLGTFLLWFGWYGFNPGSFLTILKSYGDGGTYYGQWSAIGRTAVTTTL
AGCTAALTTLFSKRLLVGHWNVLDVCNGLLGGFAAITSGCSVVEPWAAIV
CGFVAAWVLIGCNKVAEKLKYDDPLEAAQLHGGCGAWGLIFTGLFATEKY
VNEVYSGRSGRPYGLFMGGGGRLLAAQIVQILVVAGWVSATMGPLFYGLH
KLKLLRISREDETQGMDMTRHGGFAYVYHDEDDPSIKPEFMMRRVEPVND
ASPA back to topmRNA from alignment at JN650605:1..1515+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >JN650605.1-AMT1.2.m1 ID=JN650605.1-AMT1.2.m1; Name=AMT1.2; organism=Pyrus calleryana; type=mRNA; length=1515bp; location=Sequence derived from: JN650605:1..1515+ (Pyrus calleryana
atggccactctgacctgcacagcctccgacttagccccacttctcaccac
cgccaccaccgccctcaatgccacagctctctccgaattcctctgcggcc
gctttaacacaatctccaccaaattcgctgaaaccacttacgcagtcgac
aacacttacctcctcttctccgcctaccttgtcttcgccatgcagctcgg
cttcgccatgctatgcgccggctccgttcgtgccaagaacaccatgaata
tcatgctcaccaacgtccttgatgccgctgccggtgccctctcctattac
ctcttcggctttgcctttgccttcggcgctccctccaacgccttcatcgg
ccgacacttcttcggcctccgagacttcccctctgtatccggaggagact
acagcttcttcctttaccaatgggcttttgccatagccgccgctggcatc
accagcggctctatcgctgagagaacgcaattcgtcgcttacctcattta
ctcttctttcctaaccggttttgtctacccggtcgtgtctcattggtttt
ggtccgctgacggatgggccagtccaacccggtccgataacttactattt
ggctccggttcaattgattttgccggttcgggtgtggtccacatggttgg
aggcatagccggtttatggggcgccgtgatcgaaagcccgagaattggca
gatttgatcgaaccggccgatctgtggccttgcggggtcacagcgcatcc
ctagtcgttctcggtacgttcttgctttggttcgggtggtacgggttcaa
ccccggttcatttctcacgattttgaagagttacggcgatggtggtactt
attacggtcaatggagcgccattggtaggacagctgtcacaacgacattg
gctggctgcacagccgctctcactacgttgttcagcaagcgattactggt
gggtcattggaacgtgctcgacgtttgtaacggtctgttgggtggttttg
ccgcgatcacctccgggtgctcggtggtggaaccgtgggcggcaatcgtg
tgcgggttcgtggccgcatgggttttgataggatgcaacaaggtggcgga
gaagctaaaatacgatgatccattggaggctgcccagttgcatggtggat
gtggagcttgggggctgatattcacagggttgtttgcaacagaaaaatat
gtgaatgaggtgtactccggcaggtcagggcgcccgtatgggttgtttat
gggtggtggtgggaggctgttggcggcgcaaattgtgcagattttggtgg
tggcagggtgggtcagtgctaccatgggcccgctgttctatgggcttcat
aagttgaagttattgaggatctcaagggaggatgagactcaagggatgga
tatgacaaggcatggtggatttgcttatgtttaccatgatgaagatgatc
cgtccattaaacctgagtttatgatgcggagggttgagcctgttaatgat
gccagtcctgcataa back to topCoding sequence (CDS) from alignment at JN650605:1..1515+ >JN650605.1-AMT1.2.m1 ID=JN650605.1-AMT1.2.m1; Name=AMT1.2; organism=Pyrus calleryana; type=CDS; length=1515bp; location=Sequence derived from: JN650605:1..1515+ (Pyrus calleryana
atggccactctgacctgcacagcctccgacttagccccacttctcaccac
cgccaccaccgccctcaatgccacagctctctccgaattcctctgcggcc
gctttaacacaatctccaccaaattcgctgaaaccacttacgcagtcgac
aacacttacctcctcttctccgcctaccttgtcttcgccatgcagctcgg
cttcgccatgctatgcgccggctccgttcgtgccaagaacaccatgaata
tcatgctcaccaacgtccttgatgccgctgccggtgccctctcctattac
ctcttcggctttgcctttgccttcggcgctccctccaacgccttcatcgg
ccgacacttcttcggcctccgagacttcccctctgtatccggaggagact
acagcttcttcctttaccaatgggcttttgccatagccgccgctggcatc
accagcggctctatcgctgagagaacgcaattcgtcgcttacctcattta
ctcttctttcctaaccggttttgtctacccggtcgtgtctcattggtttt
ggtccgctgacggatgggccagtccaacccggtccgataacttactattt
ggctccggttcaattgattttgccggttcgggtgtggtccacatggttgg
aggcatagccggtttatggggcgccgtgatcgaaagcccgagaattggca
gatttgatcgaaccggccgatctgtggccttgcggggtcacagcgcatcc
ctagtcgttctcggtacgttcttgctttggttcgggtggtacgggttcaa
ccccggttcatttctcacgattttgaagagttacggcgatggtggtactt
attacggtcaatggagcgccattggtaggacagctgtcacaacgacattg
gctggctgcacagccgctctcactacgttgttcagcaagcgattactggt
gggtcattggaacgtgctcgacgtttgtaacggtctgttgggtggttttg
ccgcgatcacctccgggtgctcggtggtggaaccgtgggcggcaatcgtg
tgcgggttcgtggccgcatgggttttgataggatgcaacaaggtggcgga
gaagctaaaatacgatgatccattggaggctgcccagttgcatggtggat
gtggagcttgggggctgatattcacagggttgtttgcaacagaaaaatat
gtgaatgaggtgtactccggcaggtcagggcgcccgtatgggttgtttat
gggtggtggtgggaggctgttggcggcgcaaattgtgcagattttggtgg
tggcagggtgggtcagtgctaccatgggcccgctgttctatgggcttcat
aagttgaagttattgaggatctcaagggaggatgagactcaagggatgga
tatgacaaggcatggtggatttgcttatgtttaccatgatgaagatgatc
cgtccattaaacctgagtttatgatgcggagggttgagcctgttaatgat
gccagtcctgcataa back to top
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