STK, GU332504.1-STK.m1 (mRNA) Prunus serrulata var. lannesiana

Transcript Overview


Name	STK
Unique Name	GU332504.1-STK.m1
Type	mRNA
Organism	Prunus serrulata var. lannesiana ()
Source	genbank
Product	SEEDSTICK-like protein
Genbank Note	PrseSTK1; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS (MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators; binds DNA; exists as hetero and homo-dimers

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
GU332504.1-STK.m1-cds1	GU332504.1-STK.m1-cds1	Prunus serrulata var. lannesiana	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
STK	GU332504.1-STK.p1	Prunus serrulata var. lannesiana	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	291278194
nuccore	GU332504.1

Alignments

Feature Name	Type	Location	Analysis
GU332504	region	GU332504:36..704+	NCBI Rosaceae gene and mRNA sequences
scaffold_1	supercontig	scaffold_1:44885012..44889611-	Prunus persica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at GU332504:36..704+
coding sequence from alignment at GU332504:36..704+

mRNA sequence

>GU332504.1-STK.m1 ID=GU332504.1-STK.m1; Name=STK; organism=Prunus serrulata var. lannesiana; type=mRNA; length=669bp
atggggagaggaaagattgagatcaagaggatcgagaacaccacaaaccg
tcaagtgaccttctgcaaacgaagaaatggactgctgaagaaggcttatg
agctatccattctctgtgatgctgaagttgccctcattgtcttctccagt
cgaggccgcctctacgagtactctaacaacaacagcataagaaacactat
agagaggtacaagaaggcttgctcagatagctcaggttcaacctccatta
ctgaaattaatgctcaatattatcaacaggaatcggcaaagctgaggcaa
cagattcaaatgctgcagaattccaacaggcacttaatgggagatgcctt
gagtactttgagtgtgaaagagctaaagcagctggagaataggcttgaac
gaggcattaatagaatcaggtccaagaagcatgaaatgctgcttgcagaa
attgagtacttgcagaaaaaggagatcgagctggaaaacgaaaatgtgtg
tcttcgaacaaagatttcagaagttgagaggcttcaacaagcaaacatgg
ttgggccagagctgaatgcaatccaggcattagcttctcgcaatttcttt
agccaaaatatgatggagggtggagcaacctacccacagcaagacaagaa
gattctccatcttgggtaa

protein sequence of STK

>GU332504.1-STK.p1 ID=GU332504.1-STK.p1; Name=STK; organism=Prunus serrulata var. lannesiana; type=polypeptide; length=222bp
MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSILCDAEVALIVFSS
RGRLYEYSNNNSIRNTIERYKKACSDSSGSTSITEINAQYYQQESAKLRQ
QIQMLQNSNRHLMGDALSTLSVKELKQLENRLERGINRIRSKKHEMLLAE
IEYLQKKEIELENENVCLRTKISEVERLQQANMVGPELNAIQALASRNFF
SQNMMEGGATYPQQDKKILHLG

mRNA from alignment at GU332504:36..704+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>GU332504.1-STK.m1 ID=GU332504.1-STK.m1; Name=STK; organism=Prunus serrulata var. lannesiana; type=mRNA; length=669bp; location=Sequence derived from: GU332504:36..704+ (Prunus serrulata var. lannesiana
atggggagaggaaagattgagatcaagaggatcgagaacaccacaaaccg
tcaagtgaccttctgcaaacgaagaaatggactgctgaagaaggcttatg
agctatccattctctgtgatgctgaagttgccctcattgtcttctccagt
cgaggccgcctctacgagtactctaacaacaacagcataagaaacactat
agagaggtacaagaaggcttgctcagatagctcaggttcaacctccatta
ctgaaattaatgctcaatattatcaacaggaatcggcaaagctgaggcaa
cagattcaaatgctgcagaattccaacaggcacttaatgggagatgcctt
gagtactttgagtgtgaaagagctaaagcagctggagaataggcttgaac
gaggcattaatagaatcaggtccaagaagcatgaaatgctgcttgcagaa
attgagtacttgcagaaaaaggagatcgagctggaaaacgaaaatgtgtg
tcttcgaacaaagatttcagaagttgagaggcttcaacaagcaaacatgg
ttgggccagagctgaatgcaatccaggcattagcttctcgcaatttcttt
agccaaaatatgatggagggtggagcaacctacccacagcaagacaagaa
gattctccatcttgggtaa

Coding sequence (CDS) from alignment at GU332504:36..704+

>GU332504.1-STK.m1 ID=GU332504.1-STK.m1; Name=STK; organism=Prunus serrulata var. lannesiana; type=CDS; length=669bp; location=Sequence derived from: GU332504:36..704+ (Prunus serrulata var. lannesiana
atggggagaggaaagattgagatcaagaggatcgagaacaccacaaaccg
tcaagtgaccttctgcaaacgaagaaatggactgctgaagaaggcttatg
agctatccattctctgtgatgctgaagttgccctcattgtcttctccagt
cgaggccgcctctacgagtactctaacaacaacagcataagaaacactat
agagaggtacaagaaggcttgctcagatagctcaggttcaacctccatta
ctgaaattaatgctcaatattatcaacaggaatcggcaaagctgaggcaa
cagattcaaatgctgcagaattccaacaggcacttaatgggagatgcctt
gagtactttgagtgtgaaagagctaaagcagctggagaataggcttgaac
gaggcattaatagaatcaggtccaagaagcatgaaatgctgcttgcagaa
attgagtacttgcagaaaaaggagatcgagctggaaaacgaaaatgtgtg
tcttcgaacaaagatttcagaagttgagaggcttcaacaagcaaacatgg
ttgggccagagctgaatgcaatccaggcattagcttctcgcaatttcttt
agccaaaatatgatggagggtggagcaacctacccacagcaagacaagaa
gattctccatcttgggtaa