KNOX5, HQ413778.1-KNOX5.m1 (mRNA) Fragaria vesca

Transcript Overview
NameKNOX5
Unique NameHQ413778.1-KNOX5.m1
TypemRNA
OrganismFragaria vesca (Woodland strawberry (diploid))
Sourcegenbank
Productknotted-like homeobox KNOX5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HQ413778.1-KNOX5.m1-cds1HQ413778.1-KNOX5.m1-cds1Fragaria vescaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KNOX5HQ413778.1-KNOX5.p1Fragaria vescapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI329757149
nuccoreHQ413778.1
Alignments
Feature NameTypeLocationAnalysis
HQ413778 region HQ413778:1..1107+ NCBI Rosaceae gene and mRNA sequences
LG2 chromosome LG2:17410581..17413336+ Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>HQ413778.1-KNOX5.m1 ID=HQ413778.1-KNOX5.m1; Name=KNOX5; organism=Fragaria vesca; type=mRNA; length=1107bp
atgtcccacgactccgccgacatgaaaaacgacgccgccctgaataacaa
gagcgagggtggcgtcgcggtcgagagcggcggaggggacggggtcatga
actggcagaatgcgaggcataaggccgagattctagcgcacccgctttac
gagccgcttctatcggcacacgtggcgtgcctgaggatcgccacgccggt
ggaccagctgccgaggatcgacgctcagctggctcagtcgcagaatgtgg
tggctaagtactctggtatgagtcacggcatggtcggcgacgataaggag
cttgatcagttcatgaggcattatgttttgttgctatgttcttttaaaga
gcaactgcaacaacacgtccgcgtccatgcaatggaagcagtgatggctt
gctgggagattgagcaatcactacagagcctaacaggagtttcccccggg
gagggaacgggtgctacaatgtctgatgatgatgaagagcaagtagacag
tgatgcaaacttgtttgatgggagtatggatggccatgacagtatgggat
ttggccctcttatcccgacagagagcgaaaggtccttgatggagcgcgta
aggcaggagttgaagcatgaactgaaacagggttacaaggaaaaaattgt
agacataagggaggagattctgcgcaagagaagagccggaaagcttcccg
gtgacaccacctccgtcctgaaagcttggtggcaatcacattccaagtgg
ccatatccaactgaggaagacaaggctaggttggtgcaagaaactggttt
acaattgaagcagataaacaattggttcatcaatcaaaggaagaggaact
ggcacagcaatccttcaacctccacagttttaaaaagcaagcgcaaaagc
tacttacgcctgttggaacaagaagactacaagattcaagtgaaaggaat
tatcatactttgttttgacagaaagaaaaaggctaacacgattatgagca
ttcgatacaggtatgctcaagtgctgcattgggcgaatgcatgtaatatc
atatcagtaggaattcagcaactaggaactatgctactgaaaaaccgaat
tggatag
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protein sequence of KNOX5

>HQ413778.1-KNOX5.p1 ID=HQ413778.1-KNOX5.p1; Name=KNOX5; organism=Fragaria vesca; type=polypeptide; length=368bp
MSHDSADMKNDAALNNKSEGGVAVESGGGDGVMNWQNARHKAEILAHPLY
EPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSGMSHGMVGDDKE
LDQFMRHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG
EGTGATMSDDDEEQVDSDANLFDGSMDGHDSMGFGPLIPTESERSLMERV
RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKW
PYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKS
YLRLLEQEDYKIQVKGIIILCFDRKKKANTIMSIRYRYAQVLHWANACNI
ISVGIQQLGTMLLKNRIG
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mRNA from alignment at HQ413778:1..1107+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HQ413778.1-KNOX5.m1 ID=HQ413778.1-KNOX5.m1; Name=KNOX5; organism=Fragaria vesca; type=mRNA; length=1107bp; location=Sequence derived from: HQ413778:1..1107+ (Fragaria vesca
atgtcccacgactccgccgacatgaaaaacgacgccgccctgaataacaa
gagcgagggtggcgtcgcggtcgagagcggcggaggggacggggtcatga
actggcagaatgcgaggcataaggccgagattctagcgcacccgctttac
gagccgcttctatcggcacacgtggcgtgcctgaggatcgccacgccggt
ggaccagctgccgaggatcgacgctcagctggctcagtcgcagaatgtgg
tggctaagtactctggtatgagtcacggcatggtcggcgacgataaggag
cttgatcagttcatgaggcattatgttttgttgctatgttcttttaaaga
gcaactgcaacaacacgtccgcgtccatgcaatggaagcagtgatggctt
gctgggagattgagcaatcactacagagcctaacaggagtttcccccggg
gagggaacgggtgctacaatgtctgatgatgatgaagagcaagtagacag
tgatgcaaacttgtttgatgggagtatggatggccatgacagtatgggat
ttggccctcttatcccgacagagagcgaaaggtccttgatggagcgcgta
aggcaggagttgaagcatgaactgaaacagggttacaaggaaaaaattgt
agacataagggaggagattctgcgcaagagaagagccggaaagcttcccg
gtgacaccacctccgtcctgaaagcttggtggcaatcacattccaagtgg
ccatatccaactgaggaagacaaggctaggttggtgcaagaaactggttt
acaattgaagcagataaacaattggttcatcaatcaaaggaagaggaact
ggcacagcaatccttcaacctccacagttttaaaaagcaagcgcaaaagc
tacttacgcctgttggaacaagaagactacaagattcaagtgaaaggaat
tatcatactttgttttgacagaaagaaaaaggctaacacgattatgagca
ttcgatacaggtatgctcaagtgctgcattgggcgaatgcatgtaatatc
atatcagtaggaattcagcaactaggaactatgctactgaaaaaccgaat
tggatag
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Coding sequence (CDS) from alignment at HQ413778:1..1107+

>HQ413778.1-KNOX5.m1 ID=HQ413778.1-KNOX5.m1; Name=KNOX5; organism=Fragaria vesca; type=CDS; length=1107bp; location=Sequence derived from: HQ413778:1..1107+ (Fragaria vesca
atgtcccacgactccgccgacatgaaaaacgacgccgccctgaataacaa
gagcgagggtggcgtcgcggtcgagagcggcggaggggacggggtcatga
actggcagaatgcgaggcataaggccgagattctagcgcacccgctttac
gagccgcttctatcggcacacgtggcgtgcctgaggatcgccacgccggt
ggaccagctgccgaggatcgacgctcagctggctcagtcgcagaatgtgg
tggctaagtactctggtatgagtcacggcatggtcggcgacgataaggag
cttgatcagttcatgaggcattatgttttgttgctatgttcttttaaaga
gcaactgcaacaacacgtccgcgtccatgcaatggaagcagtgatggctt
gctgggagattgagcaatcactacagagcctaacaggagtttcccccggg
gagggaacgggtgctacaatgtctgatgatgatgaagagcaagtagacag
tgatgcaaacttgtttgatgggagtatggatggccatgacagtatgggat
ttggccctcttatcccgacagagagcgaaaggtccttgatggagcgcgta
aggcaggagttgaagcatgaactgaaacagggttacaaggaaaaaattgt
agacataagggaggagattctgcgcaagagaagagccggaaagcttcccg
gtgacaccacctccgtcctgaaagcttggtggcaatcacattccaagtgg
ccatatccaactgaggaagacaaggctaggttggtgcaagaaactggttt
acaattgaagcagataaacaattggttcatcaatcaaaggaagaggaact
ggcacagcaatccttcaacctccacagttttaaaaagcaagcgcaaaagc
tacttacgcctgttggaacaagaagactacaagattcaagtgaaaggaat
tatcatactttgttttgacagaaagaaaaaggctaacacgattatgagca
ttcgatacaggtatgctcaagtgctgcattgggcgaatgcatgtaatatc
atatcagtaggaattcagcaactaggaactatgctactgaaaaaccgaat
tggatag
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