WRKY5, HM122724.1-WRKY5.m1 (mRNA) Malus x domestica

Transcript Overview


Name	WRKY5
Unique Name	HM122724.1-WRKY5.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	WRKY domain class transcription factor

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM122724.1-WRKY5.m1-cds1	HM122724.1-WRKY5.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
WRKY5	HM122724.1-WRKY5.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	302399137
nuccore	HM122724.1

Alignments

Feature Name	Type	Location	Analysis
HM122724	region	HM122724:25..837+	NCBI Rosaceae gene and mRNA sequences
Chr01	chromosome	Chr01:6515875..6519420+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr8	chromosome	chr8:25743083..25746605+	Malus x domestica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM122724:25..837+
coding sequence from alignment at HM122724:25..837+

mRNA sequence

>HM122724.1-WRKY5.m1 ID=HM122724.1-WRKY5.m1; Name=WRKY5; organism=Malus x domestica; type=mRNA; length=813bp
atggcatctagaacgtcccaggcagccattctcaaccagcagcagcagca
gctgggtttgtttgagaatcaagagggagagggttgtaatacacagatgg
gtttctttcatttcccaccaaacttgaccttttcgtcgttgccgttttta
ggtcaccaatctctcaaaggcggcttcagtacggctagcatagcttctga
tgatgcaccttcaaccaccactctctctgaaaccttagtcccccggccat
cacttactccttcccctctaaggcataaacaagatcataacatcactact
actagttctgaatttggcggtggaggaggaggagcccatgcccatctcct
ttctttgcaaagatccaccgcaaatctctgggcatggggagacgtgagtg
atgatcgtgatgagtattgcctgaacagcaagagatcaagcggcggagac
gaccaacatcatccttatttaggaggggtttcagcaatgaagatgaagaa
gatgaaggcaattaggaggaaggtgagggagcctaggttttgcttcaaaa
ccctgagcgatgtggatgtgcttgatgatggttacaagtggagaaagtac
ggacagaaagtggtaaagaacacacagcatccaaggagttattatcgttg
tacgatggataactgccgcgtaaagaaacgagtagagcgattagccgagg
acccgagaatggtgatcacaacatatgaagggagacacgtgcattctcca
tctcatgatcttgaggatcaagattcacgatctccgtctcacctaaacaa
cttcttctggtag

protein sequence of WRKY5

>HM122724.1-WRKY5.p1 ID=HM122724.1-WRKY5.p1; Name=WRKY5; organism=Malus x domestica; type=polypeptide; length=270bp
MASRTSQAAILNQQQQQLGLFENQEGEGCNTQMGFFHFPPNLTFSSLPFL
GHQSLKGGFSTASIASDDAPSTTTLSETLVPRPSLTPSPLRHKQDHNITT
TSSEFGGGGGGAHAHLLSLQRSTANLWAWGDVSDDRDEYCLNSKRSSGGD
DQHHPYLGGVSAMKMKKMKAIRRKVREPRFCFKTLSDVDVLDDGYKWRKY
GQKVVKNTQHPRSYYRCTMDNCRVKKRVERLAEDPRMVITTYEGRHVHSP
SHDLEDQDSRSPSHLNNFFW

mRNA from alignment at HM122724:25..837+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM122724.1-WRKY5.m1 ID=HM122724.1-WRKY5.m1; Name=WRKY5; organism=Malus x domestica; type=mRNA; length=813bp; location=Sequence derived from: HM122724:25..837+ (Malus x domestica
atggcatctagaacgtcccaggcagccattctcaaccagcagcagcagca
gctgggtttgtttgagaatcaagagggagagggttgtaatacacagatgg
gtttctttcatttcccaccaaacttgaccttttcgtcgttgccgttttta
ggtcaccaatctctcaaaggcggcttcagtacggctagcatagcttctga
tgatgcaccttcaaccaccactctctctgaaaccttagtcccccggccat
cacttactccttcccctctaaggcataaacaagatcataacatcactact
actagttctgaatttggcggtggaggaggaggagcccatgcccatctcct
ttctttgcaaagatccaccgcaaatctctgggcatggggagacgtgagtg
atgatcgtgatgagtattgcctgaacagcaagagatcaagcggcggagac
gaccaacatcatccttatttaggaggggtttcagcaatgaagatgaagaa
gatgaaggcaattaggaggaaggtgagggagcctaggttttgcttcaaaa
ccctgagcgatgtggatgtgcttgatgatggttacaagtggagaaagtac
ggacagaaagtggtaaagaacacacagcatccaaggagttattatcgttg
tacgatggataactgccgcgtaaagaaacgagtagagcgattagccgagg
acccgagaatggtgatcacaacatatgaagggagacacgtgcattctcca
tctcatgatcttgaggatcaagattcacgatctccgtctcacctaaacaa
cttcttctggtag

Coding sequence (CDS) from alignment at HM122724:25..837+

>HM122724.1-WRKY5.m1 ID=HM122724.1-WRKY5.m1; Name=WRKY5; organism=Malus x domestica; type=CDS; length=813bp; location=Sequence derived from: HM122724:25..837+ (Malus x domestica
atggcatctagaacgtcccaggcagccattctcaaccagcagcagcagca
gctgggtttgtttgagaatcaagagggagagggttgtaatacacagatgg
gtttctttcatttcccaccaaacttgaccttttcgtcgttgccgttttta
ggtcaccaatctctcaaaggcggcttcagtacggctagcatagcttctga
tgatgcaccttcaaccaccactctctctgaaaccttagtcccccggccat
cacttactccttcccctctaaggcataaacaagatcataacatcactact
actagttctgaatttggcggtggaggaggaggagcccatgcccatctcct
ttctttgcaaagatccaccgcaaatctctgggcatggggagacgtgagtg
atgatcgtgatgagtattgcctgaacagcaagagatcaagcggcggagac
gaccaacatcatccttatttaggaggggtttcagcaatgaagatgaagaa
gatgaaggcaattaggaggaaggtgagggagcctaggttttgcttcaaaa
ccctgagcgatgtggatgtgcttgatgatggttacaagtggagaaagtac
ggacagaaagtggtaaagaacacacagcatccaaggagttattatcgttg
tacgatggataactgccgcgtaaagaaacgagtagagcgattagccgagg
acccgagaatggtgatcacaacatatgaagggagacacgtgcattctcca
tctcatgatcttgaggatcaagattcacgatctccgtctcacctaaacaa
cttcttctggtag