MYBR1, HM122634.1-MYBR1.m1 (mRNA) Malus x domestica

Transcript Overview


Name	MYBR1
Unique Name	HM122634.1-MYBR1.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	MYBR domain class transcription factor

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM122634.1-MYBR1.m1-cds1	HM122634.1-MYBR1.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MYBR1	HM122634.1-MYBR1.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	302398957
nuccore	HM122634.1

Alignments

Feature Name	Type	Location	Analysis
HM122634	region	HM122634:461..1312+	NCBI Rosaceae gene and mRNA sequences
Chr01	chromosome	Chr01:25601637..25603090+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr1	chromosome	chr1:29142223..29143676+	Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr1	chromosome	chr1:35837082..35838535+	Malus x domestica Whole Genome v1.0p Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM122634:461..1312+
coding sequence from alignment at HM122634:461..1312+

mRNA sequence

>HM122634.1-MYBR1.m1 ID=HM122634.1-MYBR1.m1; Name=MYBR1; organism=Malus x domestica; type=mRNA; length=852bp
atggagaccttgtatttcttccaggagagccagggctcggagtggactaa
ggaggagaacaagatgtttgagagtgctctagctatgttcgatgagaaaa
gcccggacaggtttctgagggtggcggagatgattccggggaagacggtg
atcgacgtgatcaagcagtaccaggagctggaggaagatgtttgtgaaat
agaatccgggaggtttcccattcctccggggtaccctcaggcttacttca
gattggagttgggggatgatcgggatttcgatgctaatcgaaagaggccg
ctggcggcggcgaggggttctgaacaggaaaggagaaagggaattccatg
gacacaagaagaacacaggcgatttctgatgggacttctaaagtacggga
aaggggactggagaaacatctcccggaattacgtggtcactaaaactccc
acacaagtagcaagccatgctcagaaatacttcatgaggcagcattcagg
agggaaagataaaaggaggccaagcatccatgacataactactgtcaacc
tcacaagcgatgctcagtcagaaactaacaggcctccttcagaccagttt
ctgccggagcagaagtccactgaatcgctgaacgagctacttgactggaa
tgcggctgatgatgaaggagctgccatgggtttcgagtctacccatggca
atctctttgatccatctccgtatgacgtagatgcagatggaatcaagatg
cagctgcagaaactatatagtcgcgctcattatgctgctcatgccactcc
tcaaaattcgctgtatctaatgcggtccgcaagacatcagattcatggat
aa

protein sequence of MYBR1

>HM122634.1-MYBR1.p1 ID=HM122634.1-MYBR1.p1; Name=MYBR1; organism=Malus x domestica; type=polypeptide; length=283bp
METLYFFQESQGSEWTKEENKMFESALAMFDEKSPDRFLRVAEMIPGKTV
IDVIKQYQELEEDVCEIESGRFPIPPGYPQAYFRLELGDDRDFDANRKRP
LAAARGSEQERRKGIPWTQEEHRRFLMGLLKYGKGDWRNISRNYVVTKTP
TQVASHAQKYFMRQHSGGKDKRRPSIHDITTVNLTSDAQSETNRPPSDQF
LPEQKSTESLNELLDWNAADDEGAAMGFESTHGNLFDPSPYDVDADGIKM
QLQKLYSRAHYAAHATPQNSLYLMRSARHQIHG

mRNA from alignment at HM122634:461..1312+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM122634.1-MYBR1.m1 ID=HM122634.1-MYBR1.m1; Name=MYBR1; organism=Malus x domestica; type=mRNA; length=852bp; location=Sequence derived from: HM122634:461..1312+ (Malus x domestica
atggagaccttgtatttcttccaggagagccagggctcggagtggactaa
ggaggagaacaagatgtttgagagtgctctagctatgttcgatgagaaaa
gcccggacaggtttctgagggtggcggagatgattccggggaagacggtg
atcgacgtgatcaagcagtaccaggagctggaggaagatgtttgtgaaat
agaatccgggaggtttcccattcctccggggtaccctcaggcttacttca
gattggagttgggggatgatcgggatttcgatgctaatcgaaagaggccg
ctggcggcggcgaggggttctgaacaggaaaggagaaagggaattccatg
gacacaagaagaacacaggcgatttctgatgggacttctaaagtacggga
aaggggactggagaaacatctcccggaattacgtggtcactaaaactccc
acacaagtagcaagccatgctcagaaatacttcatgaggcagcattcagg
agggaaagataaaaggaggccaagcatccatgacataactactgtcaacc
tcacaagcgatgctcagtcagaaactaacaggcctccttcagaccagttt
ctgccggagcagaagtccactgaatcgctgaacgagctacttgactggaa
tgcggctgatgatgaaggagctgccatgggtttcgagtctacccatggca
atctctttgatccatctccgtatgacgtagatgcagatggaatcaagatg
cagctgcagaaactatatagtcgcgctcattatgctgctcatgccactcc
tcaaaattcgctgtatctaatgcggtccgcaagacatcagattcatggat
aa

Coding sequence (CDS) from alignment at HM122634:461..1312+

>HM122634.1-MYBR1.m1 ID=HM122634.1-MYBR1.m1; Name=MYBR1; organism=Malus x domestica; type=CDS; length=852bp; location=Sequence derived from: HM122634:461..1312+ (Malus x domestica
atggagaccttgtatttcttccaggagagccagggctcggagtggactaa
ggaggagaacaagatgtttgagagtgctctagctatgttcgatgagaaaa
gcccggacaggtttctgagggtggcggagatgattccggggaagacggtg
atcgacgtgatcaagcagtaccaggagctggaggaagatgtttgtgaaat
agaatccgggaggtttcccattcctccggggtaccctcaggcttacttca
gattggagttgggggatgatcgggatttcgatgctaatcgaaagaggccg
ctggcggcggcgaggggttctgaacaggaaaggagaaagggaattccatg
gacacaagaagaacacaggcgatttctgatgggacttctaaagtacggga
aaggggactggagaaacatctcccggaattacgtggtcactaaaactccc
acacaagtagcaagccatgctcagaaatacttcatgaggcagcattcagg
agggaaagataaaaggaggccaagcatccatgacataactactgtcaacc
tcacaagcgatgctcagtcagaaactaacaggcctccttcagaccagttt
ctgccggagcagaagtccactgaatcgctgaacgagctacttgactggaa
tgcggctgatgatgaaggagctgccatgggtttcgagtctacccatggca
atctctttgatccatctccgtatgacgtagatgcagatggaatcaagatg
cagctgcagaaactatatagtcgcgctcattatgctgctcatgccactcc
tcaaaattcgctgtatctaatgcggtccgcaagacatcagattcatggat
aa