BZIP19, HM122471.1-BZIP19.m1 (mRNA) Malus x domestica

Transcript Overview


Name	BZIP19
Unique Name	HM122471.1-BZIP19.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	BZIP domain class transcription factor

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM122471.1-BZIP19.m1-cds1	HM122471.1-BZIP19.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
BZIP19	HM122471.1-BZIP19.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	302398631
nuccore	HM122471.1

Alignments

Feature Name	Type	Location	Analysis
HM122471	region	HM122471:260..1510+	NCBI Rosaceae gene and mRNA sequences
Chr12	chromosome	Chr12:13478607..13484568+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr12	chromosome	chr12:11304636..11310600+	Malus x domestica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM122471:260..1510+
coding sequence from alignment at HM122471:260..1510+

mRNA sequence

>HM122471.1-BZIP19.m1 ID=HM122471.1-BZIP19.m1; Name=BZIP19; organism=Malus x domestica; type=mRNA; length=1251bp
atgggcagtagaagagtgaaagttggtgcaaatgatggtagtaaagttgt
gaccgatatgccgagctttgttcctccagtacccactcccaatcccactg
gcacagaggggagctccattcgttcatctcaaatttcagactttggaact
cttgagcaaactcttggatttcgcatagaggatgccgttgacatcgggag
aagtccaatgtttagtcaaaacaagttaaatcgccaggcagtgggaagta
gtgttgcccaatttggtgctttaaacaagcttatgccactgcaaaaagag
ccacagccaaatttgctctctgtatcacgtagcaatcacgagaactgggg
ggagtccaatatggcagatggaagccccaggactgatacttcaacagatg
acacagaagataaaaatcagaagattgaaaggaatcaaatgactgctctt
ctagcttctgattccagtgacagatcaaaagaaaaatctggggatcaaaa
gacattacgaagactagctcaaaatcgtgaagctgccaggaaaagcagat
tacggaaaaaagcatatgtacaacaacttgagagtagtcggctgaaatta
actcagctcgagcaagagcttcagcgtgcccgtcagcagggaatattcat
ttcaagctctggagatcaatcgcattcaatgagtggaaatggtgctttgg
catttgatgtggaatatgcaaggtggctagaagagcacaacaggcaaata
aatgagttgagggctgccgttaattcacatgcgggaatgtggaagacacc
agctgaaaggtgtttcatgtggattggcggcttccgctcatctgagctcc
ttaagcttctggtgagtcaattggaacccttaacggagcagcaattggta
ggtatttataacctgcagcaatcatcccagcaggctgaagatgctctgtc
acaagggatggaggcattgcagcaatccctgtctgagaccttggcaagtg
gctcacctgcgccatcaggatcatctgggaatgtagcaaactatatgggt
caaatggccatggccatgggaaagctaggaactcttgatgggttcctccg
ccaggctgataatcttcggcaacaaacattgcaacaaatgcatcgtatac
tgacaactcgtcaatcagctcgtgcactccttgcaataaatgattatttt
tcacgtcttcgagccctcagttctctatggcttgccaggcctagggagtg
a

protein sequence of BZIP19

>HM122471.1-BZIP19.p1 ID=HM122471.1-BZIP19.p1; Name=BZIP19; organism=Malus x domestica; type=polypeptide; length=416bp
MGSRRVKVGANDGSKVVTDMPSFVPPVPTPNPTGTEGSSIRSSQISDFGT
LEQTLGFRIEDAVDIGRSPMFSQNKLNRQAVGSSVAQFGALNKLMPLQKE
PQPNLLSVSRSNHENWGESNMADGSPRTDTSTDDTEDKNQKIERNQMTAL
LASDSSDRSKEKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKL
TQLEQELQRARQQGIFISSSGDQSHSMSGNGALAFDVEYARWLEEHNRQI
NELRAAVNSHAGMWKTPAERCFMWIGGFRSSELLKLLVSQLEPLTEQQLV
GIYNLQQSSQQAEDALSQGMEALQQSLSETLASGSPAPSGSSGNVANYMG
QMAMAMGKLGTLDGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYF
SRLRALSSLWLARPRE

mRNA from alignment at HM122471:260..1510+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM122471.1-BZIP19.m1 ID=HM122471.1-BZIP19.m1; Name=BZIP19; organism=Malus x domestica; type=mRNA; length=1251bp; location=Sequence derived from: HM122471:260..1510+ (Malus x domestica
atgggcagtagaagagtgaaagttggtgcaaatgatggtagtaaagttgt
gaccgatatgccgagctttgttcctccagtacccactcccaatcccactg
gcacagaggggagctccattcgttcatctcaaatttcagactttggaact
cttgagcaaactcttggatttcgcatagaggatgccgttgacatcgggag
aagtccaatgtttagtcaaaacaagttaaatcgccaggcagtgggaagta
gtgttgcccaatttggtgctttaaacaagcttatgccactgcaaaaagag
ccacagccaaatttgctctctgtatcacgtagcaatcacgagaactgggg
ggagtccaatatggcagatggaagccccaggactgatacttcaacagatg
acacagaagataaaaatcagaagattgaaaggaatcaaatgactgctctt
ctagcttctgattccagtgacagatcaaaagaaaaatctggggatcaaaa
gacattacgaagactagctcaaaatcgtgaagctgccaggaaaagcagat
tacggaaaaaagcatatgtacaacaacttgagagtagtcggctgaaatta
actcagctcgagcaagagcttcagcgtgcccgtcagcagggaatattcat
ttcaagctctggagatcaatcgcattcaatgagtggaaatggtgctttgg
catttgatgtggaatatgcaaggtggctagaagagcacaacaggcaaata
aatgagttgagggctgccgttaattcacatgcgggaatgtggaagacacc
agctgaaaggtgtttcatgtggattggcggcttccgctcatctgagctcc
ttaagcttctggtgagtcaattggaacccttaacggagcagcaattggta
ggtatttataacctgcagcaatcatcccagcaggctgaagatgctctgtc
acaagggatggaggcattgcagcaatccctgtctgagaccttggcaagtg
gctcacctgcgccatcaggatcatctgggaatgtagcaaactatatgggt
caaatggccatggccatgggaaagctaggaactcttgatgggttcctccg
ccaggctgataatcttcggcaacaaacattgcaacaaatgcatcgtatac
tgacaactcgtcaatcagctcgtgcactccttgcaataaatgattatttt
tcacgtcttcgagccctcagttctctatggcttgccaggcctagggagtg
a

Coding sequence (CDS) from alignment at HM122471:260..1510+

>HM122471.1-BZIP19.m1 ID=HM122471.1-BZIP19.m1; Name=BZIP19; organism=Malus x domestica; type=CDS; length=1251bp; location=Sequence derived from: HM122471:260..1510+ (Malus x domestica
atgggcagtagaagagtgaaagttggtgcaaatgatggtagtaaagttgt
gaccgatatgccgagctttgttcctccagtacccactcccaatcccactg
gcacagaggggagctccattcgttcatctcaaatttcagactttggaact
cttgagcaaactcttggatttcgcatagaggatgccgttgacatcgggag
aagtccaatgtttagtcaaaacaagttaaatcgccaggcagtgggaagta
gtgttgcccaatttggtgctttaaacaagcttatgccactgcaaaaagag
ccacagccaaatttgctctctgtatcacgtagcaatcacgagaactgggg
ggagtccaatatggcagatggaagccccaggactgatacttcaacagatg
acacagaagataaaaatcagaagattgaaaggaatcaaatgactgctctt
ctagcttctgattccagtgacagatcaaaagaaaaatctggggatcaaaa
gacattacgaagactagctcaaaatcgtgaagctgccaggaaaagcagat
tacggaaaaaagcatatgtacaacaacttgagagtagtcggctgaaatta
actcagctcgagcaagagcttcagcgtgcccgtcagcagggaatattcat
ttcaagctctggagatcaatcgcattcaatgagtggaaatggtgctttgg
catttgatgtggaatatgcaaggtggctagaagagcacaacaggcaaata
aatgagttgagggctgccgttaattcacatgcgggaatgtggaagacacc
agctgaaaggtgtttcatgtggattggcggcttccgctcatctgagctcc
ttaagcttctggtgagtcaattggaacccttaacggagcagcaattggta
ggtatttataacctgcagcaatcatcccagcaggctgaagatgctctgtc
acaagggatggaggcattgcagcaatccctgtctgagaccttggcaagtg
gctcacctgcgccatcaggatcatctgggaatgtagcaaactatatgggt
caaatggccatggccatgggaaagctaggaactcttgatgggttcctccg
ccaggctgataatcttcggcaacaaacattgcaacaaatgcatcgtatac
tgacaactcgtcaatcagctcgtgcactccttgcaataaatgattatttt
tcacgtcttcgagccctcagttctctatggcttgccaggcctagggagtg
a