CUL1, EU586194.1-CUL1.m1 (mRNA) Malus x domestica

Transcript Overview


Name	CUL1
Unique Name	EU586194.1-CUL1.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	cullin-like protein 1
Genbank Note	component of SCF ubiquitin ligase complex; MdCUL1

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EU586194.1-CUL1.m1-cds1	EU586194.1-CUL1.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CUL1	EU586194.1-CUL1.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	182407846
nuccore	EU586194.1

Alignments

Feature Name	Type	Location	Analysis
EU586194	region	EU586194:1..926+	NCBI Rosaceae gene and mRNA sequences
Chr16	chromosome	Chr16:14421226..14422841+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr16	chromosome	chr16:12741798..12743413+	Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr16	chromosome	chr16:13869727..13871342+	Malus x domestica Whole Genome v1.0p Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at EU586194:1..926+
coding sequence from alignment at EU586194:1..926+

mRNA sequence

>EU586194.1-CUL1.m1 ID=EU586194.1-CUL1.m1; Name=CUL1; organism=Malus x domestica; type=mRNA; length=926bp
attaatgacaaggacctgttccctgaattctataagaaaaagcttgctcg
acgtcttctttttgacaagagtgctaatgatgaccatgagcgatgtattt
tgacaaaactgaagcaacaatgtggtggtcagtttacctcaaagatggag
ggaatggttactgatttgacattggccaaggacaaccaagtcggctttga
ggagtatctgaaaaataatccacaggcaaatcctgggattgatttgacag
ttactgtgttgaccactggcttctggccaagctacaagtcttttgacctc
aacctacccccagagatggttaagtgtgtagaacttttcagggaattcta
tcaaacaaagacaaaacacagaaaacttacatggatgtactcactgggta
cctgtaacatcattgggaaatttgaaccaaaaaccatagagcttattgtg
acgacttatcaggcttcagccctgctgctattcaatacctcagatagact
gagttactcggagattatgactcagttaaacttgactgatgatgatgttg
tcagactactccattccttgtcatgtgccaagtataagatccttaataag
gaaccaaacacaaaaactatctctcctactgattactttgagttcaatgc
taagtttactgacaaaatgaggaggatcaagattcccctccccccggtgg
acgagaagaagaaagtaattgaagatgttgacaaggacagacggtatgcc
atcgatgcatcaattgtgcgtattatgaagagccgtaaagttttgggtca
tcagcagttggttatggagtgtgtagagcagctaggtcgcatgtttcaag
cccgacttcaaagcaataaaaaaaggatcgaagatctaatcacaagagac
tacttagagcgggacaaagacaaccc

protein sequence of CUL1

>EU586194.1-CUL1.p1 ID=EU586194.1-CUL1.p1; Name=CUL1; organism=Malus x domestica; type=polypeptide; length=309bp
INDKDLFPEFYKKKLARRLLFDKSANDDHERCILTKLKQQCGGQFTSKME
GMVTDLTLAKDNQVGFEEYLKNNPQANPGIDLTVTVLTTGFWPSYKSFDL
NLPPEMVKCVELFREFYQTKTKHRKLTWMYSLGTCNIIGKFEPKTIELIV
TTYQASALLLFNTSDRLSYSEIMTQLNLTDDDVVRLLHSLSCAKYKILNK
EPNTKTISPTDYFEFNAKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYA
IDASIVRIMKSRKVLGHQQLVMECVEQLGRMFQARLQSNKKRIEDLITRD
YLERDKDNP

mRNA from alignment at EU586194:1..926+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EU586194.1-CUL1.m1 ID=EU586194.1-CUL1.m1; Name=CUL1; organism=Malus x domestica; type=mRNA; length=926bp; location=Sequence derived from: EU586194:1..926+ (Malus x domestica
attaatgacaaggacctgttccctgaattctataagaaaaagcttgctcg
acgtcttctttttgacaagagtgctaatgatgaccatgagcgatgtattt
tgacaaaactgaagcaacaatgtggtggtcagtttacctcaaagatggag
ggaatggttactgatttgacattggccaaggacaaccaagtcggctttga
ggagtatctgaaaaataatccacaggcaaatcctgggattgatttgacag
ttactgtgttgaccactggcttctggccaagctacaagtcttttgacctc
aacctacccccagagatggttaagtgtgtagaacttttcagggaattcta
tcaaacaaagacaaaacacagaaaacttacatggatgtactcactgggta
cctgtaacatcattgggaaatttgaaccaaaaaccatagagcttattgtg
acgacttatcaggcttcagccctgctgctattcaatacctcagatagact
gagttactcggagattatgactcagttaaacttgactgatgatgatgttg
tcagactactccattccttgtcatgtgccaagtataagatccttaataag
gaaccaaacacaaaaactatctctcctactgattactttgagttcaatgc
taagtttactgacaaaatgaggaggatcaagattcccctccccccggtgg
acgagaagaagaaagtaattgaagatgttgacaaggacagacggtatgcc
atcgatgcatcaattgtgcgtattatgaagagccgtaaagttttgggtca
tcagcagttggttatggagtgtgtagagcagctaggtcgcatgtttcaag
cccgacttcaaagcaataaaaaaaggatcgaagatctaatcacaagagac
tacttagagcgggacaaagacaaccc

Coding sequence (CDS) from alignment at EU586194:1..926+

>EU586194.1-CUL1.m1 ID=EU586194.1-CUL1.m1; Name=CUL1; organism=Malus x domestica; type=CDS; length=926bp; location=Sequence derived from: EU586194:1..926+ (Malus x domestica
attaatgacaaggacctgttccctgaattctataagaaaaagcttgctcg
acgtcttctttttgacaagagtgctaatgatgaccatgagcgatgtattt
tgacaaaactgaagcaacaatgtggtggtcagtttacctcaaagatggag
ggaatggttactgatttgacattggccaaggacaaccaagtcggctttga
ggagtatctgaaaaataatccacaggcaaatcctgggattgatttgacag
ttactgtgttgaccactggcttctggccaagctacaagtcttttgacctc
aacctacccccagagatggttaagtgtgtagaacttttcagggaattcta
tcaaacaaagacaaaacacagaaaacttacatggatgtactcactgggta
cctgtaacatcattgggaaatttgaaccaaaaaccatagagcttattgtg
acgacttatcaggcttcagccctgctgctattcaatacctcagatagact
gagttactcggagattatgactcagttaaacttgactgatgatgatgttg
tcagactactccattccttgtcatgtgccaagtataagatccttaataag
gaaccaaacacaaaaactatctctcctactgattactttgagttcaatgc
taagtttactgacaaaatgaggaggatcaagattcccctccccccggtgg
acgagaagaagaaagtaattgaagatgttgacaaggacagacggtatgcc
atcgatgcatcaattgtgcgtattatgaagagccgtaaagttttgggtca
tcagcagttggttatggagtgtgtagagcagctaggtcgcatgtttcaag
cccgacttcaaagcaataaaaaaaggatcgaagatctaatcacaagagac
tacttagagcgggacaaagacaaccc