STK, GU338396.1-STK.m1 (mRNA) Prunus serrulata var. lannesiana

Transcript Overview


Name	STK
Unique Name	GU338396.1-STK.m1
Type	mRNA
Organism	Prunus serrulata var. lannesiana ()
Source	genbank
Product	SEEDSTICK-like protein
Genbank Note	transcription factor; prsestk-1; MEF2 myocyte enhancer factor 2-like; type II subfamily of MADS box family of eukaryotic transcriptional regulators

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
GU338396.1-STK.m1-cds1	GU338396.1-STK.m1-cds1	Prunus serrulata var. lannesiana	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
STK	GU338396.1-STK.p1	Prunus serrulata var. lannesiana	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	284799139
nuccore	GU338396.1

Alignments

Feature Name	Type	Location	Analysis
GU338396	region	GU338396:36..704+	NCBI Rosaceae gene and mRNA sequences
scaffold_1	supercontig	scaffold_1:44885012..44889611-	Prunus persica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at GU338396:36..704+
coding sequence from alignment at GU338396:36..704+

mRNA sequence

>GU338396.1-STK.m1 ID=GU338396.1-STK.m1; Name=STK; organism=Prunus serrulata var. lannesiana; type=mRNA; length=669bp
atggggagaggaaagattgagatcaagaggatcgagaacaccacgaaccg
tcaagtgaccttctgcaaacgaagaaatggactgctgaagaaggcttatg
agctatccattctctgtgatgctgaagttgccctcattgtcttctccagt
cgaggccgcctctacgagtactctaacaacaacagcataagaaacactat
agagaggtacaagaaggcttgctcagatagctcaggttcaacctccatta
ctgaaattaatgctcaatattatcaacaggaatcggcaaagctgaggcaa
cagattcaaatgctgcagaattccaacaggcacttaatgggagatgcctt
gagtactttgagtgtgaaagagctaaagcagctggagaataggcttgaac
gaggcattaacagaatcaggtccaagaagcatgaaatgctgcttgcagaa
attgagtacttgcagaaaaaggagatcgagctggaaaacgaaaatgtgtg
tcttcgaactaagatatcagaagttgagaggcttcagcaagcaaacatgg
ttgggccagagctgaatgcaatccaggcattagtttctcgcaatttcttc
agccaaaatataatggagggtggagcaacctacccacagcaagacaagaa
gattctccatcttgggtaa

protein sequence of STK

>GU338396.1-STK.p1 ID=GU338396.1-STK.p1; Name=STK; organism=Prunus serrulata var. lannesiana; type=polypeptide; length=222bp
MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSILCDAEVALIVFSS
RGRLYEYSNNNSIRNTIERYKKACSDSSGSTSITEINAQYYQQESAKLRQ
QIQMLQNSNRHLMGDALSTLSVKELKQLENRLERGINRIRSKKHEMLLAE
IEYLQKKEIELENENVCLRTKISEVERLQQANMVGPELNAIQALVSRNFF
SQNIMEGGATYPQQDKKILHLG

mRNA from alignment at GU338396:36..704+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>GU338396.1-STK.m1 ID=GU338396.1-STK.m1; Name=STK; organism=Prunus serrulata var. lannesiana; type=mRNA; length=669bp; location=Sequence derived from: GU338396:36..704+ (Prunus serrulata var. lannesiana
atggggagaggaaagattgagatcaagaggatcgagaacaccacgaaccg
tcaagtgaccttctgcaaacgaagaaatggactgctgaagaaggcttatg
agctatccattctctgtgatgctgaagttgccctcattgtcttctccagt
cgaggccgcctctacgagtactctaacaacaacagcataagaaacactat
agagaggtacaagaaggcttgctcagatagctcaggttcaacctccatta
ctgaaattaatgctcaatattatcaacaggaatcggcaaagctgaggcaa
cagattcaaatgctgcagaattccaacaggcacttaatgggagatgcctt
gagtactttgagtgtgaaagagctaaagcagctggagaataggcttgaac
gaggcattaacagaatcaggtccaagaagcatgaaatgctgcttgcagaa
attgagtacttgcagaaaaaggagatcgagctggaaaacgaaaatgtgtg
tcttcgaactaagatatcagaagttgagaggcttcagcaagcaaacatgg
ttgggccagagctgaatgcaatccaggcattagtttctcgcaatttcttc
agccaaaatataatggagggtggagcaacctacccacagcaagacaagaa
gattctccatcttgggtaa

Coding sequence (CDS) from alignment at GU338396:36..704+

>GU338396.1-STK.m1 ID=GU338396.1-STK.m1; Name=STK; organism=Prunus serrulata var. lannesiana; type=CDS; length=669bp; location=Sequence derived from: GU338396:36..704+ (Prunus serrulata var. lannesiana
atggggagaggaaagattgagatcaagaggatcgagaacaccacgaaccg
tcaagtgaccttctgcaaacgaagaaatggactgctgaagaaggcttatg
agctatccattctctgtgatgctgaagttgccctcattgtcttctccagt
cgaggccgcctctacgagtactctaacaacaacagcataagaaacactat
agagaggtacaagaaggcttgctcagatagctcaggttcaacctccatta
ctgaaattaatgctcaatattatcaacaggaatcggcaaagctgaggcaa
cagattcaaatgctgcagaattccaacaggcacttaatgggagatgcctt
gagtactttgagtgtgaaagagctaaagcagctggagaataggcttgaac
gaggcattaacagaatcaggtccaagaagcatgaaatgctgcttgcagaa
attgagtacttgcagaaaaaggagatcgagctggaaaacgaaaatgtgtg
tcttcgaactaagatatcagaagttgagaggcttcagcaagcaaacatgg
ttgggccagagctgaatgcaatccaggcattagtttctcgcaatttcttc
agccaaaatataatggagggtggagcaacctacccacagcaagacaagaa
gattctccatcttgggtaa