PGIP, AF196952.1-PGIP.m1 (mRNA) Neillia hanceana

Transcript Overview
NamePGIP
Unique NameAF196952.1-PGIP.m1
TypemRNA
OrganismNeillia hanceana ()
Sourcegenbank
Productpolygalacturonase inhibitor protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PGIPAF196952.1-PGIPNeillia hanceanagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AF196952.1-PGIP.m1-cds1AF196952.1-PGIP.m1-cds1Neillia hanceanaCDS
AF196952.1-PGIP.m1-cds2AF196952.1-PGIP.m1-cds2Neillia hanceanaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
PGIPAF196952.1-PGIP.p1Neillia hanceanapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI13873282
nuccoreAF196952.1
Alignments
Feature NameTypeLocationAnalysis
AF196952 region AF196952:1..842+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>AF196952.1-PGIP.m1 ID=AF196952.1-PGIP.m1; Name=PGIP; organism=Neillia hanceana; type=mRNA; length=751bp
tcatggaacccagacaatgactgctgtgactggtattctgtcacctgtga
ttccaccaccaaccgcatcaactccctcaccatcttcgccggagaagtct
ccggccaaatcccgacccaagtcggggacttgccgtatcttgaaaccctt
gaatttcacaagcaacccaatctcactggcccaatccagccctccattgt
gaagctcaaaagcctcaagttcctgcgcctcagctggaccaacctctcag
gctctgtccctgacttcctcagccaactcaagaacctcacctttcttgat
ctctctttcagcaacttcacaggctccatccccagctcactttcaaagct
cccgaacctgaacgctcttcatctcgatcgtaacaagctcacaggtcata
tcccggagtcattcggagagttccagggcagcgttccagatctctatctc
tcccacaaccagctctcaggcagcataccaacctcatttgccaaaatgga
tttcagcagtatagacttatcccgtaacaagcttgaaggcgatgcatcca
tgatattcgggtcgaacaagacaacccagattgtggatctgtcgaggaac
ttgctggaatttaatctgtcaaaggtggtgtttccgaagagcttgacttc
cctggatctcaaccataaccaaatcacagggagtattcctgtggagctga
cccaattggatttgcagttcctgaacgtgagctacaacaggctgtgtggt
a
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protein sequence of PGIP

>AF196952.1-PGIP.p1 ID=AF196952.1-PGIP.p1; Name=PGIP; organism=Neillia hanceana; type=polypeptide; length=250bp
SWNPDNDCCDWYSVTCDSTTNRINSLTIFAGEVSGQIPTQVGDLPYLETL
EFHKQPNLTGPIQPSIVKLKSLKFLRLSWTNLSGSVPDFLSQLKNLTFLD
LSFSNFTGSIPSSLSKLPNLNALHLDRNKLTGHIPESFGEFQGSVPDLYL
SHNQLSGSIPTSFAKMDFSSIDLSRNKLEGDASMIFGSNKTTQIVDLSRN
LLEFNLSKVVFPKSLTSLDLNHNQITGSIPVELTQLDLQFLNVSYNRLCG
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mRNA from alignment at AF196952:1..842+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AF196952.1-PGIP.m1 ID=AF196952.1-PGIP.m1; Name=PGIP; organism=Neillia hanceana; type=mRNA; length=842bp; location=Sequence derived from: AF196952:1..842+ (Neillia hanceana
tcatggaacccagacaatgactgctgtgactggtattctgtcacctgtga
ttccaccaccaaccgcatcaactccctcaccatcttcgccggagaagtct
ccggccaaatcccgacccaagtcggggacttgccgtatcttgaaaccctt
gaatttcacaagcaacccaatctcactggcccaatccagccctccattgt
gaagctcaaaagcctcaagttcctgcgcctcagctggaccaacctctcag
gctctgtccctgacttcctcagccaactcaagaacctcacctttcttgat
ctctctttcagcaacttcacaggctccatccccagctcactttcaaagct
cccgaacctgaacgctcttcatctcgatcgtaacaagctcacaggtttca
tactcctttgatatttctctgtctggctaacaagtactggcattagatac
aaaatttgcatatgaaattaacacctcgcttacaggtcatatcccggagt
cattcggagagttccagggcagcgttccagatctctatctctcccacaac
cagctctcaggcagcataccaacctcatttgccaaaatggatttcagcag
tatagacttatcccgtaacaagcttgaaggcgatgcatccatgatattcg
ggtcgaacaagacaacccagattgtggatctgtcgaggaacttgctggaa
tttaatctgtcaaaggtggtgtttccgaagagcttgacttccctggatct
caaccataaccaaatcacagggagtattcctgtggagctgacccaattgg
atttgcagttcctgaacgtgagctacaacaggctgtgtggta
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Coding sequence (CDS) from alignment at AF196952:1..842+

>AF196952.1-PGIP.m1 ID=AF196952.1-PGIP.m1; Name=PGIP; organism=Neillia hanceana; type=CDS; length=751bp; location=Sequence derived from: AF196952:1..842+ (Neillia hanceana
tcatggaacccagacaatgactgctgtgactggtattctgtcacctgtga
ttccaccaccaaccgcatcaactccctcaccatcttcgccggagaagtct
ccggccaaatcccgacccaagtcggggacttgccgtatcttgaaaccctt
gaatttcacaagcaacccaatctcactggcccaatccagccctccattgt
gaagctcaaaagcctcaagttcctgcgcctcagctggaccaacctctcag
gctctgtccctgacttcctcagccaactcaagaacctcacctttcttgat
ctctctttcagcaacttcacaggctccatccccagctcactttcaaagct
cccgaacctgaacgctcttcatctcgatcgtaacaagctcacaggtcata
tcccggagtcattcggagagttccagggcagcgttccagatctctatctc
tcccacaaccagctctcaggcagcataccaacctcatttgccaaaatgga
tttcagcagtatagacttatcccgtaacaagcttgaaggcgatgcatcca
tgatattcgggtcgaacaagacaacccagattgtggatctgtcgaggaac
ttgctggaatttaatctgtcaaaggtggtgtttccgaagagcttgacttc
cctggatctcaaccataaccaaatcacagggagtattcctgtggagctga
cccaattggatttgcagttcctgaacgtgagctacaacaggctgtgtggt
a
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