SDH5, AY244811.1-SDH5.m1 (mRNA) Malus x domestica

Transcript Overview
NameSDH5
Unique NameAY244811.1-SDH5.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductNAD-dependent sorbitol dehydrogenase 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AY244811.1-SDH5.m1-cds1AY244811.1-SDH5.m1-cds1Malus x domesticaCDS
AY244811.1-SDH5.m1-cds2AY244811.1-SDH5.m1-cds2Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
SDH5AY244811.1-SDH5.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI37936019
nuccoreAY244811.1
Alignments
Feature NameTypeLocationAnalysis
AY244811 region AY244811:1..997+ NCBI Rosaceae gene and mRNA sequences
Chr01 chromosome Chr01:29343475..29344472+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr1 chromosome chr1:25173278..25174275- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr1 chromosome chr1:31445028..31446025+ Malus x domestica Whole Genome v1.0p Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>AY244811.1-SDH5.m1 ID=AY244811.1-SDH5.m1; Name=SDH5; organism=Malus x domestica; type=mRNA; length=856bp
agatcctacctttcaagctccccgctattggaccgaatgatgttcaaatt
cgaattaaggctgtcggcatttgcggaagtgatgttcactacctcaagac
catgaaatgtgcggattttgaggttaaagagccgatggtgatcggacatg
agtgtgctgggatcgtagacaaagttgggagcgaggtgaagcatctggtg
cctggtgaccgagtggcggttgagcccggcatcagctgcgcacattgcca
gcagtgcaaaggaggccgctacaatctctgtcccgacatgaagttttttg
ccaccccaccggttcacggtgccttggctaatcagattgtgcaccctgca
gatctgtgctttaagttgccggaaaatgtgagcttggaggaaggggcaat
gtgtgaacccttgagtgttggggttcacgcttgtcggcgagccaatgttg
gtcctgaaacaactgttctgatcatcggcgcagggcctattggtctggtc
tcagttttggccgctcgtgctttcggggcaccaagaattgttatagtgga
tatggatgacaagcgtctagcgatggcaaagtctctcggggctgatgaca
ccgtcaaagtttcgacaaaaatggaggatttagatgatgaagttgccgaa
attaaaaaagccatgatctccgaagtggatgtgaccttcgattgtgtggg
tttcaacaaaaccatggcgaccggcctcaatgctactcgtcctggcggaa
aagtctgccttgtcggaatgggacacggcctgatgacagtgcctctcacc
cctgctgctgctagggaggtcgacgttgttggagttttcagatacaagaa
cacatg
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protein sequence of SDH5

>AY244811.1-SDH5.p1 ID=AY244811.1-SDH5.p1; Name=SDH5; organism=Malus x domestica; type=polypeptide; length=284bp
ILPFKLPAIGPNDVQIRIKAVGICGSDVHYLKTMKCADFEVKEPMVIGHE
CAGIVDKVGSEVKHLVPGDRVAVEPGISCAHCQQCKGGRYNLCPDMKFFA
TPPVHGALANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANVG
PETTVLIIGAGPIGLVSVLAARAFGAPRIVIVDMDDKRLAMAKSLGADDT
VKVSTKMEDLDDEVAEIKKAMISEVDVTFDCVGFNKTMATGLNATRPGGK
VCLVGMGHGLMTVPLTPAAAREVDVVGVFRYKNT
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mRNA from alignment at AY244811:1..997+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AY244811.1-SDH5.m1 ID=AY244811.1-SDH5.m1; Name=SDH5; organism=Malus x domestica; type=mRNA; length=997bp; location=Sequence derived from: AY244811:1..997+ (Malus x domestica
agatcctacctttcaagctccccgctattggtaataatctctctcctttt
taatttcgttgttgttctgttcggttttcagttccagtttgcagttctat
atttttttggttttcttggatgtatagctaacttgtttttcccctatttt
gttgggatttctttattttaggaccgaatgatgttcaaattcgaattaag
gctgtcggcatttgcggaagtgatgttcactacctcaagaccatgaaatg
tgcggattttgaggttaaagagccgatggtgatcggacatgagtgtgctg
ggatcgtagacaaagttgggagcgaggtgaagcatctggtgcctggtgac
cgagtggcggttgagcccggcatcagctgcgcacattgccagcagtgcaa
aggaggccgctacaatctctgtcccgacatgaagttttttgccaccccac
cggttcacggtgccttggctaatcagattgtgcaccctgcagatctgtgc
tttaagttgccggaaaatgtgagcttggaggaaggggcaatgtgtgaacc
cttgagtgttggggttcacgcttgtcggcgagccaatgttggtcctgaaa
caactgttctgatcatcggcgcagggcctattggtctggtctcagttttg
gccgctcgtgctttcggggcaccaagaattgttatagtggatatggatga
caagcgtctagcgatggcaaagtctctcggggctgatgacaccgtcaaag
tttcgacaaaaatggaggatttagatgatgaagttgccgaaattaaaaaa
gccatgatctccgaagtggatgtgaccttcgattgtgtgggtttcaacaa
aaccatggcgaccggcctcaatgctactcgtcctggcggaaaagtctgcc
ttgtcggaatgggacacggcctgatgacagtgcctctcacccctgctgct
gctagggaggtcgacgttgttggagttttcagatacaagaacacatg
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Coding sequence (CDS) from alignment at AY244811:1..997+

>AY244811.1-SDH5.m1 ID=AY244811.1-SDH5.m1; Name=SDH5; organism=Malus x domestica; type=CDS; length=856bp; location=Sequence derived from: AY244811:1..997+ (Malus x domestica
agatcctacctttcaagctccccgctattggaccgaatgatgttcaaatt
cgaattaaggctgtcggcatttgcggaagtgatgttcactacctcaagac
catgaaatgtgcggattttgaggttaaagagccgatggtgatcggacatg
agtgtgctgggatcgtagacaaagttgggagcgaggtgaagcatctggtg
cctggtgaccgagtggcggttgagcccggcatcagctgcgcacattgcca
gcagtgcaaaggaggccgctacaatctctgtcccgacatgaagttttttg
ccaccccaccggttcacggtgccttggctaatcagattgtgcaccctgca
gatctgtgctttaagttgccggaaaatgtgagcttggaggaaggggcaat
gtgtgaacccttgagtgttggggttcacgcttgtcggcgagccaatgttg
gtcctgaaacaactgttctgatcatcggcgcagggcctattggtctggtc
tcagttttggccgctcgtgctttcggggcaccaagaattgttatagtgga
tatggatgacaagcgtctagcgatggcaaagtctctcggggctgatgaca
ccgtcaaagtttcgacaaaaatggaggatttagatgatgaagttgccgaa
attaaaaaagccatgatctccgaagtggatgtgaccttcgattgtgtggg
tttcaacaaaaccatggcgaccggcctcaatgctactcgtcctggcggaa
aagtctgccttgtcggaatgggacacggcctgatgacagtgcctctcacc
cctgctgctgctagggaggtcgacgttgttggagttttcagatacaagaa
cacatg
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