PGIP, AY333103.1-PGIP.m1 (mRNA) Pyrus pyrifolia

Transcript Overview
NamePGIP
Unique NameAY333103.1-PGIP.m1
TypemRNA
OrganismPyrus pyrifolia ()
Sourcegenbank
Productpolygalacturonase-inhibiting protein
Genbank Noteinhibitor of fungal polygalacturonases
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AY333103.1-PGIP.m1-cds1AY333103.1-PGIP.m1-cds1Pyrus pyrifoliaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
PGIPAY333103.1-PGIP.p1Pyrus pyrifoliapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI33087508
nuccoreAY333103.1
Alignments
Feature NameTypeLocationAnalysis
AY333103 region AY333103:12..1004+ NCBI Rosaceae gene and mRNA sequences
scaffold00001 supercontig scaffold00001:1263454..1264446+ Pyrus communis Genome v1.0 Draft Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>AY333103.1-PGIP.m1 ID=AY333103.1-PGIP.m1; Name=PGIP; organism=Pyrus pyrifolia; type=mRNA; length=993bp
atggaactcaagttctccaccttcctctccctaaccctactcttctcctc
cgtcctaaaccccgctctctccgatctctgcaaccccgacgacaaaaaag
tcctcctacaaatcaagaaagccttcggcgacccctacgtcttggcctca
tggaaatcagacactgactgctgcgattggtactgcgtcacctgtgactc
caccacaaaccgcatcaactccctcaccatcttcgccggccaggtatcag
gccaaatccccgccctagtaggagacttgccataccttgaaacccttgaa
ttccacaagcaacccaatctcactggcccaatccaacccgccattgccaa
gctcaaaggactcaagtctctcaggctcagctggaccaacctctcaggct
ctgtccctgacttcctcagccaactcaagaacctcacattcctcgacctc
tccttcaacaacctcaccggtgccatccccagctcgctttctgagctccc
aaacctcagcgctcttcatctagaccgcaataagctcacaggtcatattc
cgaaatcgtttgggcagttcattggcaacgttccagacctgtatctctcc
cacaaccagctctctggcaacattccaacctcattcgctcagatggactt
caccagcatagacttatcacggaacaagctcgaaggtgacgcatccgtga
tatttgggctgaacaagacaacccagattgtggacctgtccaggaacttg
ctggaatttaatctgtcaaaggtggagtttccgacaagcttgacctcgct
ggatatcaaccacaataagatctacgggagtatcccagtggagtttacgc
aactgaatttccagttcctgaacgtgagctacaacaggctgtgtggtcag
attcctgtgggtggaaagttgcagagcttcgacgagtattcttatttcca
taaccgatgcttgtgcggtgctccactcccaagctgcaagtaa
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protein sequence of PGIP

>AY333103.1-PGIP.p1 ID=AY333103.1-PGIP.p1; Name=PGIP; organism=Pyrus pyrifolia; type=polypeptide; length=330bp
MELKFSTFLSLTLLFSSVLNPALSDLCNPDDKKVLLQIKKAFGDPYVLAS
WKSDTDCCDWYCVTCDSTTNRINSLTIFAGQVSGQIPALVGDLPYLETLE
FHKQPNLTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDL
SFNNLTGAIPSSLSELPNLSALHLDRNKLTGHIPKSFGQFIGNVPDLYLS
HNQLSGNIPTSFAQMDFTSIDLSRNKLEGDASVIFGLNKTTQIVDLSRNL
LEFNLSKVEFPTSLTSLDINHNKIYGSIPVEFTQLNFQFLNVSYNRLCGQ
IPVGGKLQSFDEYSYFHNRCLCGAPLPSCK
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mRNA from alignment at AY333103:12..1004+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AY333103.1-PGIP.m1 ID=AY333103.1-PGIP.m1; Name=PGIP; organism=Pyrus pyrifolia; type=mRNA; length=993bp; location=Sequence derived from: AY333103:12..1004+ (Pyrus pyrifolia
atggaactcaagttctccaccttcctctccctaaccctactcttctcctc
cgtcctaaaccccgctctctccgatctctgcaaccccgacgacaaaaaag
tcctcctacaaatcaagaaagccttcggcgacccctacgtcttggcctca
tggaaatcagacactgactgctgcgattggtactgcgtcacctgtgactc
caccacaaaccgcatcaactccctcaccatcttcgccggccaggtatcag
gccaaatccccgccctagtaggagacttgccataccttgaaacccttgaa
ttccacaagcaacccaatctcactggcccaatccaacccgccattgccaa
gctcaaaggactcaagtctctcaggctcagctggaccaacctctcaggct
ctgtccctgacttcctcagccaactcaagaacctcacattcctcgacctc
tccttcaacaacctcaccggtgccatccccagctcgctttctgagctccc
aaacctcagcgctcttcatctagaccgcaataagctcacaggtcatattc
cgaaatcgtttgggcagttcattggcaacgttccagacctgtatctctcc
cacaaccagctctctggcaacattccaacctcattcgctcagatggactt
caccagcatagacttatcacggaacaagctcgaaggtgacgcatccgtga
tatttgggctgaacaagacaacccagattgtggacctgtccaggaacttg
ctggaatttaatctgtcaaaggtggagtttccgacaagcttgacctcgct
ggatatcaaccacaataagatctacgggagtatcccagtggagtttacgc
aactgaatttccagttcctgaacgtgagctacaacaggctgtgtggtcag
attcctgtgggtggaaagttgcagagcttcgacgagtattcttatttcca
taaccgatgcttgtgcggtgctccactcccaagctgcaagtaa
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Coding sequence (CDS) from alignment at AY333103:12..1004+

>AY333103.1-PGIP.m1 ID=AY333103.1-PGIP.m1; Name=PGIP; organism=Pyrus pyrifolia; type=CDS; length=993bp; location=Sequence derived from: AY333103:12..1004+ (Pyrus pyrifolia
atggaactcaagttctccaccttcctctccctaaccctactcttctcctc
cgtcctaaaccccgctctctccgatctctgcaaccccgacgacaaaaaag
tcctcctacaaatcaagaaagccttcggcgacccctacgtcttggcctca
tggaaatcagacactgactgctgcgattggtactgcgtcacctgtgactc
caccacaaaccgcatcaactccctcaccatcttcgccggccaggtatcag
gccaaatccccgccctagtaggagacttgccataccttgaaacccttgaa
ttccacaagcaacccaatctcactggcccaatccaacccgccattgccaa
gctcaaaggactcaagtctctcaggctcagctggaccaacctctcaggct
ctgtccctgacttcctcagccaactcaagaacctcacattcctcgacctc
tccttcaacaacctcaccggtgccatccccagctcgctttctgagctccc
aaacctcagcgctcttcatctagaccgcaataagctcacaggtcatattc
cgaaatcgtttgggcagttcattggcaacgttccagacctgtatctctcc
cacaaccagctctctggcaacattccaacctcattcgctcagatggactt
caccagcatagacttatcacggaacaagctcgaaggtgacgcatccgtga
tatttgggctgaacaagacaacccagattgtggacctgtccaggaacttg
ctggaatttaatctgtcaaaggtggagtttccgacaagcttgacctcgct
ggatatcaaccacaataagatctacgggagtatcccagtggagtttacgc
aactgaatttccagttcctgaacgtgagctacaacaggctgtgtggtcag
attcctgtgggtggaaagttgcagagcttcgacgagtattcttatttcca
taaccgatgcttgtgcggtgctccactcccaagctgcaagtaa
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