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Transcript Overview
| Name | LOX |
|---|
| Unique Name | EF568783.1-LOX.m1 |
|---|
| Type | mRNA |
|---|
| Organism | Prunus persica (Peach) |
|---|
| Source | genbank |
|---|
| Product | lipoxygenase |
|---|
Alignments
The following features are aligned
| Feature Name | Type | Location | Analysis | Reference |
|---|
| EF568783 | region | EF568783:73..2874 + | NCBI Rosaceae gene and mRNA sequences | n/a |
| scaffold_6 | supercontig | LOX:1..2802 .
scaffold_6:26689708..26714015 - | | n/a |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| EF568783.1-LOX.m1-cds1 | EF568783.1-LOX.m1-cds1 | Prunus persica | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| LOX | EF568783.1-LOX.p1 | Prunus persica | polypeptide |
Cross References
External references for this mRNA
Sequences
The
following sequences are available for this feature:
mRNA sequence >EF568783.1-LOX.m1 ID=EF568783.1-LOX.m1; Name=LOX; organism=Prunus persica; type=mRNA; length=2802bp
atgcttcattgcaagtatctcagtcctttgagcttcaggacaaaagctcc
ctgtggagctcggatgaactcagttgttgcagcagcaacaatcaacaatc
cagatcatgccacttcacccaatggcttgttgcctatgactatgaaattc
ttccctggtttcttgcgcatgactgatgttgcacgatctcaaccgttgac
tgtggcttcatctgccaagccgtcccagaacatcaccgttgatccacacc
ccaaagacggaggcaagaagatcaaagggagagtggtgttgatgaagaag
aatgttttggagttaaatgacctcaaagcatcgtttcttgatcgtgttca
tgagctgtggggcaaagtggtttctctgcagctcattagttctgttaatg
gtgaccctgaaaatgggcgtggaaaagttggaaagccagcatatttggaa
gattgggttaccacaatcactcccttaacagcaggggagtgtacatttga
ggttacttttgattgggatgaggagattggagtcccaggagcattcataa
taagaaatgatcatcacagtgagttttacttgaagactctcacacttgaa
gatgttcctggagaaggtcgaatccactttgtctgcaactcatgggtgta
tcctgctaaaaactacaaaaaagaccgtgttttcttcgctaacaagacat
atcttttaagtgatacaccagggccactaaagaaattcagagaagaagag
ctagtaaacttgagaggagatgatgatgatgaaacagaacttcaggaatg
ggacagggtttatggctatgcctactataatgatttggggaaaccgcata
agggtccaaaatatgcccgtccaattctcggtggctcgagtaagttccct
tatcctcggaggggaagaacaggaagacgaccaactaaggaagatcctga
aagtgagaccccgatgatgcttcttttgagcttattcatatatgttccga
gagatgaacggtttggtcacttaaagatgtcagacttgattgcttatgcc
ctgaaatccatatctcagctccttagacctgatgagctagcatctatact
tgttggcccccaaaaacattttgacagcttggaagatgttcttaaactct
atgaaggaggaatagagttgcctgagggtatactaaaatctgtaagggat
aacatccctgcagagacgatcaaggaacttttccgaacggatggtgaaaa
attcccgaaattcccagtgcctcaagtgatcaaagtggataagccagcat
ggagaactgatgaagaatttgcaagagaaatgctggctggagtaaatcct
gtcgccattcgtcgtctccaagaatttccacccgctagcaagctagacca
aaaagcatatggggatcaaacaagtcaaataaccaaagaacacatagaac
ataacttaaaaggactgagcatagatgaggcaatcaagaacaacaagcta
ttcatattagaccaccacgatgcattgatgccgtacctgaggcgtataaa
cacaacttccacaaaaacttattcaagcagaacactacttttcttagaaa
atgatgggactttgaagccattagctattgagttaagcttgccacatcct
gatggagatcaatttggctgcattagcaaagtctatactccctctagcca
gggcgtcgagagttccatttggcaacttgctaaagcttatgtgaatgtaa
atgactctggccatcatcagctcatcagccactggttaaaaactcatgca
gtgattgaaccttttgtgatagcagcaaatcggcagttgagcgtgcttca
cccgattcataaacttctgcatcctcattttcgtgaaactatgaatgcaa
acgcaatagctagagaggttcttacaaatgccggtggaattatagaggaa
acagtctttcctgcaaagttttcaatggaatggtcgtctgtaatgtacaa
gaactgggtctttcctgaacaagcgcttcccgtggatctcatcaaaagag
gaatggcagttgaagatccaaaatcgtcgcacagtgtacgcttactgata
gaggactatccatatgctgctgatgggcttgagatatggtctgcaattaa
aacatgggttaaagagttttgctccttctactataaaaatgatgaaatgg
ttcaaaatgactcagaactccagtcttggtggaaggaactcagagaagaa
ggtcatggtgacaagaaagatgaaccatggtggcctaaaatgcagacttg
tgaagagctgatagaatcatgcaccattatcatatggctctcttcagcct
atcatgcagcaatcaactatggccagtactctataggtggatacgtcccg
aaccggccaagtataagcctgcacttcatgcctgaagaaggcactcctga
gtatgaggagctcaaaactaaccctgacaaggcattcttgaaaacattta
cacctcagctgcagaccctgcttggcatggcctccatagaaatcttatca
aggcacccagttgatgagctttatcttgggcagagaggcaccccagaatg
gacaacagatgcaaacatgttgcaagcctttgaggattttagaaagaagc
tggaaggaattgagaaaagaattataaaaatgaacaaggatgagaaattg
aagaaccgagttggaccggccaagatcccatacactttgctctatccttc
tagtgagcctggacttacaggcaagggaattcccaacagtgtcaacatct
aa back to topprotein sequence of LOX >EF568783.1-LOX.p1 ID=EF568783.1-LOX.p1; Name=LOX; organism=Prunus persica; type=polypeptide; length=933bp
MLHCKYLSPLSFRTKAPCGARMNSVVAAATINNPDHATSPNGLLPMTMKF
FPGFLRMTDVARSQPLTVASSAKPSQNITVDPHPKDGGKKIKGRVVLMKK
NVLELNDLKASFLDRVHELWGKVVSLQLISSVNGDPENGRGKVGKPAYLE
DWVTTITPLTAGECTFEVTFDWDEEIGVPGAFIIRNDHHSEFYLKTLTLE
DVPGEGRIHFVCNSWVYPAKNYKKDRVFFANKTYLLSDTPGPLKKFREEE
LVNLRGDDDDETELQEWDRVYGYAYYNDLGKPHKGPKYARPILGGSSKFP
YPRRGRTGRRPTKEDPESETPMMLLLSLFIYVPRDERFGHLKMSDLIAYA
LKSISQLLRPDELASILVGPQKHFDSLEDVLKLYEGGIELPEGILKSVRD
NIPAETIKELFRTDGEKFPKFPVPQVIKVDKPAWRTDEEFAREMLAGVNP
VAIRRLQEFPPASKLDQKAYGDQTSQITKEHIEHNLKGLSIDEAIKNNKL
FILDHHDALMPYLRRINTTSTKTYSSRTLLFLENDGTLKPLAIELSLPHP
DGDQFGCISKVYTPSSQGVESSIWQLAKAYVNVNDSGHHQLISHWLKTHA
VIEPFVIAANRQLSVLHPIHKLLHPHFRETMNANAIAREVLTNAGGIIEE
TVFPAKFSMEWSSVMYKNWVFPEQALPVDLIKRGMAVEDPKSSHSVRLLI
EDYPYAADGLEIWSAIKTWVKEFCSFYYKNDEMVQNDSELQSWWKELREE
GHGDKKDEPWWPKMQTCEELIESCTIIIWLSSAYHAAINYGQYSIGGYVP
NRPSISLHFMPEEGTPEYEELKTNPDKAFLKTFTPQLQTLLGMASIEILS
RHPVDELYLGQRGTPEWTTDANMLQAFEDFRKKLEGIEKRIIKMNKDEKL
KNRVGPAKIPYTLLYPSSEPGLTGKGIPNSVNI back to topmRNA from alignment at EF568783:73..2874+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >EF568783.1-LOX.m1 ID=EF568783.1-LOX.m1; Name=LOX; organism=Prunus persica; type=mRNA; length=2802bp; location=Sequence derived from: EF568783:73..2874+ (Prunus persica
atgcttcattgcaagtatctcagtcctttgagcttcaggacaaaagctcc
ctgtggagctcggatgaactcagttgttgcagcagcaacaatcaacaatc
cagatcatgccacttcacccaatggcttgttgcctatgactatgaaattc
ttccctggtttcttgcgcatgactgatgttgcacgatctcaaccgttgac
tgtggcttcatctgccaagccgtcccagaacatcaccgttgatccacacc
ccaaagacggaggcaagaagatcaaagggagagtggtgttgatgaagaag
aatgttttggagttaaatgacctcaaagcatcgtttcttgatcgtgttca
tgagctgtggggcaaagtggtttctctgcagctcattagttctgttaatg
gtgaccctgaaaatgggcgtggaaaagttggaaagccagcatatttggaa
gattgggttaccacaatcactcccttaacagcaggggagtgtacatttga
ggttacttttgattgggatgaggagattggagtcccaggagcattcataa
taagaaatgatcatcacagtgagttttacttgaagactctcacacttgaa
gatgttcctggagaaggtcgaatccactttgtctgcaactcatgggtgta
tcctgctaaaaactacaaaaaagaccgtgttttcttcgctaacaagacat
atcttttaagtgatacaccagggccactaaagaaattcagagaagaagag
ctagtaaacttgagaggagatgatgatgatgaaacagaacttcaggaatg
ggacagggtttatggctatgcctactataatgatttggggaaaccgcata
agggtccaaaatatgcccgtccaattctcggtggctcgagtaagttccct
tatcctcggaggggaagaacaggaagacgaccaactaaggaagatcctga
aagtgagaccccgatgatgcttcttttgagcttattcatatatgttccga
gagatgaacggtttggtcacttaaagatgtcagacttgattgcttatgcc
ctgaaatccatatctcagctccttagacctgatgagctagcatctatact
tgttggcccccaaaaacattttgacagcttggaagatgttcttaaactct
atgaaggaggaatagagttgcctgagggtatactaaaatctgtaagggat
aacatccctgcagagacgatcaaggaacttttccgaacggatggtgaaaa
attcccgaaattcccagtgcctcaagtgatcaaagtggataagccagcat
ggagaactgatgaagaatttgcaagagaaatgctggctggagtaaatcct
gtcgccattcgtcgtctccaagaatttccacccgctagcaagctagacca
aaaagcatatggggatcaaacaagtcaaataaccaaagaacacatagaac
ataacttaaaaggactgagcatagatgaggcaatcaagaacaacaagcta
ttcatattagaccaccacgatgcattgatgccgtacctgaggcgtataaa
cacaacttccacaaaaacttattcaagcagaacactacttttcttagaaa
atgatgggactttgaagccattagctattgagttaagcttgccacatcct
gatggagatcaatttggctgcattagcaaagtctatactccctctagcca
gggcgtcgagagttccatttggcaacttgctaaagcttatgtgaatgtaa
atgactctggccatcatcagctcatcagccactggttaaaaactcatgca
gtgattgaaccttttgtgatagcagcaaatcggcagttgagcgtgcttca
cccgattcataaacttctgcatcctcattttcgtgaaactatgaatgcaa
acgcaatagctagagaggttcttacaaatgccggtggaattatagaggaa
acagtctttcctgcaaagttttcaatggaatggtcgtctgtaatgtacaa
gaactgggtctttcctgaacaagcgcttcccgtggatctcatcaaaagag
gaatggcagttgaagatccaaaatcgtcgcacagtgtacgcttactgata
gaggactatccatatgctgctgatgggcttgagatatggtctgcaattaa
aacatgggttaaagagttttgctccttctactataaaaatgatgaaatgg
ttcaaaatgactcagaactccagtcttggtggaaggaactcagagaagaa
ggtcatggtgacaagaaagatgaaccatggtggcctaaaatgcagacttg
tgaagagctgatagaatcatgcaccattatcatatggctctcttcagcct
atcatgcagcaatcaactatggccagtactctataggtggatacgtcccg
aaccggccaagtataagcctgcacttcatgcctgaagaaggcactcctga
gtatgaggagctcaaaactaaccctgacaaggcattcttgaaaacattta
cacctcagctgcagaccctgcttggcatggcctccatagaaatcttatca
aggcacccagttgatgagctttatcttgggcagagaggcaccccagaatg
gacaacagatgcaaacatgttgcaagcctttgaggattttagaaagaagc
tggaaggaattgagaaaagaattataaaaatgaacaaggatgagaaattg
aagaaccgagttggaccggccaagatcccatacactttgctctatccttc
tagtgagcctggacttacaggcaagggaattcccaacagtgtcaacatct
aa back to topCoding sequence (CDS) from alignment at EF568783:73..2874+ >EF568783.1-LOX.m1 ID=EF568783.1-LOX.m1; Name=LOX; organism=Prunus persica; type=CDS; length=2802bp; location=Sequence derived from: EF568783:73..2874+ (Prunus persica
atgcttcattgcaagtatctcagtcctttgagcttcaggacaaaagctcc
ctgtggagctcggatgaactcagttgttgcagcagcaacaatcaacaatc
cagatcatgccacttcacccaatggcttgttgcctatgactatgaaattc
ttccctggtttcttgcgcatgactgatgttgcacgatctcaaccgttgac
tgtggcttcatctgccaagccgtcccagaacatcaccgttgatccacacc
ccaaagacggaggcaagaagatcaaagggagagtggtgttgatgaagaag
aatgttttggagttaaatgacctcaaagcatcgtttcttgatcgtgttca
tgagctgtggggcaaagtggtttctctgcagctcattagttctgttaatg
gtgaccctgaaaatgggcgtggaaaagttggaaagccagcatatttggaa
gattgggttaccacaatcactcccttaacagcaggggagtgtacatttga
ggttacttttgattgggatgaggagattggagtcccaggagcattcataa
taagaaatgatcatcacagtgagttttacttgaagactctcacacttgaa
gatgttcctggagaaggtcgaatccactttgtctgcaactcatgggtgta
tcctgctaaaaactacaaaaaagaccgtgttttcttcgctaacaagacat
atcttttaagtgatacaccagggccactaaagaaattcagagaagaagag
ctagtaaacttgagaggagatgatgatgatgaaacagaacttcaggaatg
ggacagggtttatggctatgcctactataatgatttggggaaaccgcata
agggtccaaaatatgcccgtccaattctcggtggctcgagtaagttccct
tatcctcggaggggaagaacaggaagacgaccaactaaggaagatcctga
aagtgagaccccgatgatgcttcttttgagcttattcatatatgttccga
gagatgaacggtttggtcacttaaagatgtcagacttgattgcttatgcc
ctgaaatccatatctcagctccttagacctgatgagctagcatctatact
tgttggcccccaaaaacattttgacagcttggaagatgttcttaaactct
atgaaggaggaatagagttgcctgagggtatactaaaatctgtaagggat
aacatccctgcagagacgatcaaggaacttttccgaacggatggtgaaaa
attcccgaaattcccagtgcctcaagtgatcaaagtggataagccagcat
ggagaactgatgaagaatttgcaagagaaatgctggctggagtaaatcct
gtcgccattcgtcgtctccaagaatttccacccgctagcaagctagacca
aaaagcatatggggatcaaacaagtcaaataaccaaagaacacatagaac
ataacttaaaaggactgagcatagatgaggcaatcaagaacaacaagcta
ttcatattagaccaccacgatgcattgatgccgtacctgaggcgtataaa
cacaacttccacaaaaacttattcaagcagaacactacttttcttagaaa
atgatgggactttgaagccattagctattgagttaagcttgccacatcct
gatggagatcaatttggctgcattagcaaagtctatactccctctagcca
gggcgtcgagagttccatttggcaacttgctaaagcttatgtgaatgtaa
atgactctggccatcatcagctcatcagccactggttaaaaactcatgca
gtgattgaaccttttgtgatagcagcaaatcggcagttgagcgtgcttca
cccgattcataaacttctgcatcctcattttcgtgaaactatgaatgcaa
acgcaatagctagagaggttcttacaaatgccggtggaattatagaggaa
acagtctttcctgcaaagttttcaatggaatggtcgtctgtaatgtacaa
gaactgggtctttcctgaacaagcgcttcccgtggatctcatcaaaagag
gaatggcagttgaagatccaaaatcgtcgcacagtgtacgcttactgata
gaggactatccatatgctgctgatgggcttgagatatggtctgcaattaa
aacatgggttaaagagttttgctccttctactataaaaatgatgaaatgg
ttcaaaatgactcagaactccagtcttggtggaaggaactcagagaagaa
ggtcatggtgacaagaaagatgaaccatggtggcctaaaatgcagacttg
tgaagagctgatagaatcatgcaccattatcatatggctctcttcagcct
atcatgcagcaatcaactatggccagtactctataggtggatacgtcccg
aaccggccaagtataagcctgcacttcatgcctgaagaaggcactcctga
gtatgaggagctcaaaactaaccctgacaaggcattcttgaaaacattta
cacctcagctgcagaccctgcttggcatggcctccatagaaatcttatca
aggcacccagttgatgagctttatcttgggcagagaggcaccccagaatg
gacaacagatgcaaacatgttgcaagcctttgaggattttagaaagaagc
tggaaggaattgagaaaagaattataaaaatgaacaaggatgagaaattg
aagaaccgagttggaccggccaagatcccatacactttgctctatccttc
tagtgagcctggacttacaggcaagggaattcccaacagtgtcaacatct
aa back to top
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