SDH5, AY849315.1-SDH5.m1 (mRNA) Malus x domestica

Transcript Overview
NameSDH5
Unique NameAY849315.1-SDH5.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
Productsorbitol dehydrogenase
Genbank NoteSDH
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AY849315.1-SDH5.m1-cds1AY849315.1-SDH5.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
SDH5AY849315.1-SDH5.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI57116677
nuccoreAY849315.1
Alignments
Feature NameTypeLocationAnalysis
AY849315 region AY849315:92..1207+ NCBI Rosaceae gene and mRNA sequences
Chr01 chromosome Chr01:22284289..22286463- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr1 chromosome chr1:14157026..14159200- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr1 chromosome chr1:18063359..18065533- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>AY849315.1-SDH5.m1 ID=AY849315.1-SDH5.m1; Name=SDH5; organism=Malus x domestica; type=mRNA; length=1116bp
atgggaaagggaggcatgtctgatggagatcatgctgatcgctgttgtgg
ggaagcaataaatggtgatgttcaacaagagaacatggctgcttggcttc
ttggtgttaaaaacctcaagattcaaccttacaagctccctaatcttgga
ccccatgatgttagagtccggctgaaggctgttggcatatgtggcagtga
tgttcaccacttcaagaacatgaggtgtgtagattttatagttaaagagc
caatggttattgggcatgagtgtgctgggatcatagaggaagttgggagt
gaggtcgaggatttggtgccaggcgatcgtgtggcactagagcctggtat
cagttgcaagcgatgcaacctctgcaaacaaggccggtacaatctatgcc
gcaagatgaagttttttggctcccctccaaataatggttgtctggcaaat
caggttgtccatccaggagatctatgttttaaactgccagacaatgtgag
tttggaggaaggcgcgatgtgtgagcccttaagtgttggtattcatgctt
gtcgccgggcaaatgtctgtcaagaaacaaatgtcttggtcgtgggagca
ggacctataggacttgttacactgctagccgctcgtgcttttggggcgcc
ccgaattgtcattgcggatgtgaatgacgagcgtttgttgattgcaaaga
gtcttggcgcagatgcagtcgttaaggtttcaacaaatattgaggatgta
gctgaagaagtggctaagatacaaaaggttttggaaaatggagtggatgt
aaccttcgactgtgcaggctttaacaaaaccataacaacagctttgagtg
ctactcgtcccggaggcaaagtttgccttgtgggaatgggtcagagagag
atgactctccctctcgctaccagagagattgatgtaattggaattttccg
ataccagaacacatggccgctgtgccttgagtttctgagaagtggtaaga
ttgatgtgaagcccctcataacacatcggtttggattttctcagaaggag
gtggaagaagcctttgaaaccagtgctcgcggaggcaatgccattaaggt
catgtttaacctgtaa
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protein sequence of SDH5

>AY849315.1-SDH5.p1 ID=AY849315.1-SDH5.p1; Name=SDH5; organism=Malus x domestica; type=polypeptide; length=371bp
MGKGGMSDGDHADRCCGEAINGDVQQENMAAWLLGVKNLKIQPYKLPNLG
PHDVRVRLKAVGICGSDVHHFKNMRCVDFIVKEPMVIGHECAGIIEEVGS
EVEDLVPGDRVALEPGISCKRCNLCKQGRYNLCRKMKFFGSPPNNGCLAN
QVVHPGDLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVCQETNVLVVGA
GPIGLVTLLAARAFGAPRIVIADVNDERLLIAKSLGADAVVKVSTNIEDV
AEEVAKIQKVLENGVDVTFDCAGFNKTITTALSATRPGGKVCLVGMGQRE
MTLPLATREIDVIGIFRYQNTWPLCLEFLRSGKIDVKPLITHRFGFSQKE
VEEAFETSARGGNAIKVMFNL
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mRNA from alignment at AY849315:92..1207+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AY849315.1-SDH5.m1 ID=AY849315.1-SDH5.m1; Name=SDH5; organism=Malus x domestica; type=mRNA; length=1116bp; location=Sequence derived from: AY849315:92..1207+ (Malus x domestica
atgggaaagggaggcatgtctgatggagatcatgctgatcgctgttgtgg
ggaagcaataaatggtgatgttcaacaagagaacatggctgcttggcttc
ttggtgttaaaaacctcaagattcaaccttacaagctccctaatcttgga
ccccatgatgttagagtccggctgaaggctgttggcatatgtggcagtga
tgttcaccacttcaagaacatgaggtgtgtagattttatagttaaagagc
caatggttattgggcatgagtgtgctgggatcatagaggaagttgggagt
gaggtcgaggatttggtgccaggcgatcgtgtggcactagagcctggtat
cagttgcaagcgatgcaacctctgcaaacaaggccggtacaatctatgcc
gcaagatgaagttttttggctcccctccaaataatggttgtctggcaaat
caggttgtccatccaggagatctatgttttaaactgccagacaatgtgag
tttggaggaaggcgcgatgtgtgagcccttaagtgttggtattcatgctt
gtcgccgggcaaatgtctgtcaagaaacaaatgtcttggtcgtgggagca
ggacctataggacttgttacactgctagccgctcgtgcttttggggcgcc
ccgaattgtcattgcggatgtgaatgacgagcgtttgttgattgcaaaga
gtcttggcgcagatgcagtcgttaaggtttcaacaaatattgaggatgta
gctgaagaagtggctaagatacaaaaggttttggaaaatggagtggatgt
aaccttcgactgtgcaggctttaacaaaaccataacaacagctttgagtg
ctactcgtcccggaggcaaagtttgccttgtgggaatgggtcagagagag
atgactctccctctcgctaccagagagattgatgtaattggaattttccg
ataccagaacacatggccgctgtgccttgagtttctgagaagtggtaaga
ttgatgtgaagcccctcataacacatcggtttggattttctcagaaggag
gtggaagaagcctttgaaaccagtgctcgcggaggcaatgccattaaggt
catgtttaacctgtaa
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Coding sequence (CDS) from alignment at AY849315:92..1207+

>AY849315.1-SDH5.m1 ID=AY849315.1-SDH5.m1; Name=SDH5; organism=Malus x domestica; type=CDS; length=1116bp; location=Sequence derived from: AY849315:92..1207+ (Malus x domestica
atgggaaagggaggcatgtctgatggagatcatgctgatcgctgttgtgg
ggaagcaataaatggtgatgttcaacaagagaacatggctgcttggcttc
ttggtgttaaaaacctcaagattcaaccttacaagctccctaatcttgga
ccccatgatgttagagtccggctgaaggctgttggcatatgtggcagtga
tgttcaccacttcaagaacatgaggtgtgtagattttatagttaaagagc
caatggttattgggcatgagtgtgctgggatcatagaggaagttgggagt
gaggtcgaggatttggtgccaggcgatcgtgtggcactagagcctggtat
cagttgcaagcgatgcaacctctgcaaacaaggccggtacaatctatgcc
gcaagatgaagttttttggctcccctccaaataatggttgtctggcaaat
caggttgtccatccaggagatctatgttttaaactgccagacaatgtgag
tttggaggaaggcgcgatgtgtgagcccttaagtgttggtattcatgctt
gtcgccgggcaaatgtctgtcaagaaacaaatgtcttggtcgtgggagca
ggacctataggacttgttacactgctagccgctcgtgcttttggggcgcc
ccgaattgtcattgcggatgtgaatgacgagcgtttgttgattgcaaaga
gtcttggcgcagatgcagtcgttaaggtttcaacaaatattgaggatgta
gctgaagaagtggctaagatacaaaaggttttggaaaatggagtggatgt
aaccttcgactgtgcaggctttaacaaaaccataacaacagctttgagtg
ctactcgtcccggaggcaaagtttgccttgtgggaatgggtcagagagag
atgactctccctctcgctaccagagagattgatgtaattggaattttccg
ataccagaacacatggccgctgtgccttgagtttctgagaagtggtaaga
ttgatgtgaagcccctcataacacatcggtttggattttctcagaaggag
gtggaagaagcctttgaaaccagtgctcgcggaggcaatgccattaaggt
catgtttaacctgtaa
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