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Transcript Overview
| Name | PEPC |
|---|
| Unique Name | EU315246.1-PEPC.m1 |
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| Type | mRNA |
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| Organism | Malus x domestica (Apple) |
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| Source | genbank |
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| Product | phosphoenolpyruvate carboxylase |
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| Genbank Note | PEPC |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| EU315246.1-PEPC.m1-cds1 | EU315246.1-PEPC.m1-cds1 | Malus x domestica | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| PEPC | EU315246.1-PEPC.p1 | Malus x domestica | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| EU315246 |
region |
EU315246:1..2898+ |
NCBI Rosaceae gene and mRNA sequences |
| Chr03 |
chromosome |
Chr03:32684448..32689094- |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
| chr3 |
chromosome |
chr3:28680160..28684780+ |
Malus x domestica Whole Genome v1.0 Assembly & Annotation |
| chr3 |
chromosome |
chr3:33675937..33680557- |
Malus x domestica Whole Genome v1.0p Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >EU315246.1-PEPC.m1 ID=EU315246.1-PEPC.m1; Name=PEPC; organism=Malus x domestica; type=mRNA; length=2898bp
atggcgcgcaacaacttggagaagatggcatccattgatgcccagatgag
gctcttggttcctggaaaagtttctgaggatgacaagttgattgagtacg
atgcccttctactgaccggttccttgacatcctgcaagatttacatggag
aggatctcagggaaacggttcaagcatgttatgagctttctgctgagtat
gaaggaaagcatgacccgaaaaagctatcagagcttgggagatgtattga
caagtttggacccaggggattctattgttgttgcaaaatccttcgcccac
atgcttagcttggccaacttggctgaggaggtccagattgcttaccgcag
acgaaacaagctgaaaaagggtgactttgcagatgaaaattctgcaacga
ctgaatcagacattgaagaaactctcaagaggcttgtaggggatctaaaa
aagtccccccaagaggtttttgatgctctcaagaatcagactgtagatct
ggtcctcactgctcatcctacacaatctgttcgtagatccttgcttcaga
agcacggaaggattcggaattgtttaacccagttgtacgcgaaagacatt
actcctgatgataaacaggaacttgatgaggcacttcagagagagatcca
agctgcatttcgtacggatgagatccgaagaacagctcccactccacaag
atgagatgagagcagggatgagctatttccatgaaacaatttggaagggt
gtcccaaagtttctccgtcgtgtggatacagctttgaagaatattggggt
taatgaacgtgttccccataatgccccacttattcagttttcatcttgga
tgggtggtgatcgtggtggtaatccaagagtaactcccgaggtcacaagg
gatgtttgcctactagctagaatgatggctgcaaacttgtactattctca
gatagaggatcttatgtttgagttgtctatgtggcgctgcaatgatgaac
tccgtgttcgtgcagatgtacttcacaggtccacgaggagagatgcaaag
cactacatagaattttggaagcaagttcctccaaatgaaccctaccgtgt
gattctcggtgatttaagggataagctttatcatacacgtgaacgttctc
gtcagttgttagccagtgggcactctgacattccggaggaggcaacactg
atcagtgttgagcagttcttggaacctctcgaactctgctacagatcact
ctgctcttgtggtgaccgagcaattgctgatggatcacttcttgatttct
taaggcaagtgtccacctttggactttcacttgtgaagctcgatattagg
caagaatctgacaggcatactgatgtgatagacgccatcaccaagcatct
ggaaattggttcctatcgtgagtggtctgaagaacgccgtcaggagtggc
ttttatctgaactatgtggcaagcgcccactgtttggtcctgatcttcca
aaaacggaagaaatctctgatgttttggacacattacatgtgatatcaga
acttccatctgataactttggagcatacatcatctcaatggcgactgctc
catccgatgtgctcgcagttgagctcatgcaacgtgaatgccgcgtgaag
aaaccactaagagtcgttccactgtttgagaagcttgcagacctggaggc
tgctcctgctgctttgtcacggcttttctcgattaattggtatagagagc
ggatcaacggaacgcaagaagtcatgattgggtactcagattctggtaaa
gatgcagggcgtttctctgcagcctggcagttatacaaggcacaggagga
gcttatcaacgttgctaagaaatttggtgtgaagctaactatgttccatg
gtcgtggtggcactgttggaaggggaggtggtcccacccatcttgctata
ttgtctcaaccaccagatacaattcatggttcactccgtgtcactgtcca
aggtgaagttattgagcagtcgtttggagaggagctcttgtgttttagaa
cactccagcgtttcacagctgctacacttgaacatggcatgcatatgcca
gtttcaccaaaaccggaacggcgtgcacttatggacgaaatggcagttgt
atctacagaggactatcgctccattgttttccaagaaccccgatttgtgg
agtacttccgtcttgctacaccggagctggagtatggtcggatgaacatt
ggcagtcgcccctcaaagcgaaagcctagtggaggcattgagtcccttcg
tgcaatcccatggattttcgcctggacacaaacaaggttccatcttccag
tgtggttaggcttcggagcagccttcagacatgtcattaagaaggacatt
aagaatcttcacatgctgcaagagatgtacaaccaatggcctttcttcag
ggtcactattgatttggttgaaatggtgtttgccaagggaaaccccggaa
tagctgcgttatatgataaactccttgtttcagaagacctatggtcattc
ggagagctattacggtccaactatgaagaaaccaagaactttctgttaca
gattgctggacacaaggatcttctcgaaggtgacccgcacttgaagcaaa
ggctccgcctgcgtgattcatacatcacaaccctcaatgtttgccaagca
tatacactgaaacggatccgtgatccaaacttccacgtgacactgcggcc
acacatctcaaaggaaatcaacgaaacaaacaagccggctaatgaacttg
taaagctgaacccaacaagcgagtacgcgcctggtctggaggacaccctc
atcttgacaatgaagggtattgctgccggcttacagaacaccggttaa back to topprotein sequence of PEPC >EU315246.1-PEPC.p1 ID=EU315246.1-PEPC.p1; Name=PEPC; organism=Malus x domestica; type=polypeptide; length=965bp
MARNNLEKMASIDAQMRLLVPGKVSEDDKLIEYDALLLTGSLTSCKIYME
RISGKRFKHVMSFLLSMKESMTRKSYQSLGDVLTSLDPGDSIVVAKSFAH
MLSLANLAEEVQIAYRRRNKLKKGDFADENSATTESDIEETLKRLVGDLK
KSPQEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDI
TPDDKQELDEALQREIQAAFRTDEIRRTAPTPQDEMRAGMSYFHETIWKG
VPKFLRRVDTALKNIGVNERVPHNAPLIQFSSWMGGDRGGNPRVTPEVTR
DVCLLARMMAANLYYSQIEDLMFELSMWRCNDELRVRADVLHRSTRRDAK
HYIEFWKQVPPNEPYRVILGDLRDKLYHTRERSRQLLASGHSDIPEEATL
ISVEQFLEPLELCYRSLCSCGDRAIADGSLLDFLRQVSTFGLSLVKLDIR
QESDRHTDVIDAITKHLEIGSYREWSEERRQEWLLSELCGKRPLFGPDLP
KTEEISDVLDTLHVISELPSDNFGAYIISMATAPSDVLAVELMQRECRVK
KPLRVVPLFEKLADLEAAPAALSRLFSINWYRERINGTQEVMIGYSDSGK
DAGRFSAAWQLYKAQEELINVAKKFGVKLTMFHGRGGTVGRGGGPTHLAI
LSQPPDTIHGSLRVTVQGEVIEQSFGEELLCFRTLQRFTAATLEHGMHMP
VSPKPERRALMDEMAVVSTEDYRSIVFQEPRFVEYFRLATPELEYGRMNI
GSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFRHVIKKDI
KNLHMLQEMYNQWPFFRVTIDLVEMVFAKGNPGIAALYDKLLVSEDLWSF
GELLRSNYEETKNFLLQIAGHKDLLEGDPHLKQRLRLRDSYITTLNVCQA
YTLKRIRDPNFHVTLRPHISKEINETNKPANELVKLNPTSEYAPGLEDTL
ILTMKGIAAGLQNTG back to topmRNA from alignment at EU315246:1..2898+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >EU315246.1-PEPC.m1 ID=EU315246.1-PEPC.m1; Name=PEPC; organism=Malus x domestica; type=mRNA; length=2898bp; location=Sequence derived from: EU315246:1..2898+ (Malus x domestica
atggcgcgcaacaacttggagaagatggcatccattgatgcccagatgag
gctcttggttcctggaaaagtttctgaggatgacaagttgattgagtacg
atgcccttctactgaccggttccttgacatcctgcaagatttacatggag
aggatctcagggaaacggttcaagcatgttatgagctttctgctgagtat
gaaggaaagcatgacccgaaaaagctatcagagcttgggagatgtattga
caagtttggacccaggggattctattgttgttgcaaaatccttcgcccac
atgcttagcttggccaacttggctgaggaggtccagattgcttaccgcag
acgaaacaagctgaaaaagggtgactttgcagatgaaaattctgcaacga
ctgaatcagacattgaagaaactctcaagaggcttgtaggggatctaaaa
aagtccccccaagaggtttttgatgctctcaagaatcagactgtagatct
ggtcctcactgctcatcctacacaatctgttcgtagatccttgcttcaga
agcacggaaggattcggaattgtttaacccagttgtacgcgaaagacatt
actcctgatgataaacaggaacttgatgaggcacttcagagagagatcca
agctgcatttcgtacggatgagatccgaagaacagctcccactccacaag
atgagatgagagcagggatgagctatttccatgaaacaatttggaagggt
gtcccaaagtttctccgtcgtgtggatacagctttgaagaatattggggt
taatgaacgtgttccccataatgccccacttattcagttttcatcttgga
tgggtggtgatcgtggtggtaatccaagagtaactcccgaggtcacaagg
gatgtttgcctactagctagaatgatggctgcaaacttgtactattctca
gatagaggatcttatgtttgagttgtctatgtggcgctgcaatgatgaac
tccgtgttcgtgcagatgtacttcacaggtccacgaggagagatgcaaag
cactacatagaattttggaagcaagttcctccaaatgaaccctaccgtgt
gattctcggtgatttaagggataagctttatcatacacgtgaacgttctc
gtcagttgttagccagtgggcactctgacattccggaggaggcaacactg
atcagtgttgagcagttcttggaacctctcgaactctgctacagatcact
ctgctcttgtggtgaccgagcaattgctgatggatcacttcttgatttct
taaggcaagtgtccacctttggactttcacttgtgaagctcgatattagg
caagaatctgacaggcatactgatgtgatagacgccatcaccaagcatct
ggaaattggttcctatcgtgagtggtctgaagaacgccgtcaggagtggc
ttttatctgaactatgtggcaagcgcccactgtttggtcctgatcttcca
aaaacggaagaaatctctgatgttttggacacattacatgtgatatcaga
acttccatctgataactttggagcatacatcatctcaatggcgactgctc
catccgatgtgctcgcagttgagctcatgcaacgtgaatgccgcgtgaag
aaaccactaagagtcgttccactgtttgagaagcttgcagacctggaggc
tgctcctgctgctttgtcacggcttttctcgattaattggtatagagagc
ggatcaacggaacgcaagaagtcatgattgggtactcagattctggtaaa
gatgcagggcgtttctctgcagcctggcagttatacaaggcacaggagga
gcttatcaacgttgctaagaaatttggtgtgaagctaactatgttccatg
gtcgtggtggcactgttggaaggggaggtggtcccacccatcttgctata
ttgtctcaaccaccagatacaattcatggttcactccgtgtcactgtcca
aggtgaagttattgagcagtcgtttggagaggagctcttgtgttttagaa
cactccagcgtttcacagctgctacacttgaacatggcatgcatatgcca
gtttcaccaaaaccggaacggcgtgcacttatggacgaaatggcagttgt
atctacagaggactatcgctccattgttttccaagaaccccgatttgtgg
agtacttccgtcttgctacaccggagctggagtatggtcggatgaacatt
ggcagtcgcccctcaaagcgaaagcctagtggaggcattgagtcccttcg
tgcaatcccatggattttcgcctggacacaaacaaggttccatcttccag
tgtggttaggcttcggagcagccttcagacatgtcattaagaaggacatt
aagaatcttcacatgctgcaagagatgtacaaccaatggcctttcttcag
ggtcactattgatttggttgaaatggtgtttgccaagggaaaccccggaa
tagctgcgttatatgataaactccttgtttcagaagacctatggtcattc
ggagagctattacggtccaactatgaagaaaccaagaactttctgttaca
gattgctggacacaaggatcttctcgaaggtgacccgcacttgaagcaaa
ggctccgcctgcgtgattcatacatcacaaccctcaatgtttgccaagca
tatacactgaaacggatccgtgatccaaacttccacgtgacactgcggcc
acacatctcaaaggaaatcaacgaaacaaacaagccggctaatgaacttg
taaagctgaacccaacaagcgagtacgcgcctggtctggaggacaccctc
atcttgacaatgaagggtattgctgccggcttacagaacaccggttaa back to topCoding sequence (CDS) from alignment at EU315246:1..2898+ >EU315246.1-PEPC.m1 ID=EU315246.1-PEPC.m1; Name=PEPC; organism=Malus x domestica; type=CDS; length=2898bp; location=Sequence derived from: EU315246:1..2898+ (Malus x domestica
atggcgcgcaacaacttggagaagatggcatccattgatgcccagatgag
gctcttggttcctggaaaagtttctgaggatgacaagttgattgagtacg
atgcccttctactgaccggttccttgacatcctgcaagatttacatggag
aggatctcagggaaacggttcaagcatgttatgagctttctgctgagtat
gaaggaaagcatgacccgaaaaagctatcagagcttgggagatgtattga
caagtttggacccaggggattctattgttgttgcaaaatccttcgcccac
atgcttagcttggccaacttggctgaggaggtccagattgcttaccgcag
acgaaacaagctgaaaaagggtgactttgcagatgaaaattctgcaacga
ctgaatcagacattgaagaaactctcaagaggcttgtaggggatctaaaa
aagtccccccaagaggtttttgatgctctcaagaatcagactgtagatct
ggtcctcactgctcatcctacacaatctgttcgtagatccttgcttcaga
agcacggaaggattcggaattgtttaacccagttgtacgcgaaagacatt
actcctgatgataaacaggaacttgatgaggcacttcagagagagatcca
agctgcatttcgtacggatgagatccgaagaacagctcccactccacaag
atgagatgagagcagggatgagctatttccatgaaacaatttggaagggt
gtcccaaagtttctccgtcgtgtggatacagctttgaagaatattggggt
taatgaacgtgttccccataatgccccacttattcagttttcatcttgga
tgggtggtgatcgtggtggtaatccaagagtaactcccgaggtcacaagg
gatgtttgcctactagctagaatgatggctgcaaacttgtactattctca
gatagaggatcttatgtttgagttgtctatgtggcgctgcaatgatgaac
tccgtgttcgtgcagatgtacttcacaggtccacgaggagagatgcaaag
cactacatagaattttggaagcaagttcctccaaatgaaccctaccgtgt
gattctcggtgatttaagggataagctttatcatacacgtgaacgttctc
gtcagttgttagccagtgggcactctgacattccggaggaggcaacactg
atcagtgttgagcagttcttggaacctctcgaactctgctacagatcact
ctgctcttgtggtgaccgagcaattgctgatggatcacttcttgatttct
taaggcaagtgtccacctttggactttcacttgtgaagctcgatattagg
caagaatctgacaggcatactgatgtgatagacgccatcaccaagcatct
ggaaattggttcctatcgtgagtggtctgaagaacgccgtcaggagtggc
ttttatctgaactatgtggcaagcgcccactgtttggtcctgatcttcca
aaaacggaagaaatctctgatgttttggacacattacatgtgatatcaga
acttccatctgataactttggagcatacatcatctcaatggcgactgctc
catccgatgtgctcgcagttgagctcatgcaacgtgaatgccgcgtgaag
aaaccactaagagtcgttccactgtttgagaagcttgcagacctggaggc
tgctcctgctgctttgtcacggcttttctcgattaattggtatagagagc
ggatcaacggaacgcaagaagtcatgattgggtactcagattctggtaaa
gatgcagggcgtttctctgcagcctggcagttatacaaggcacaggagga
gcttatcaacgttgctaagaaatttggtgtgaagctaactatgttccatg
gtcgtggtggcactgttggaaggggaggtggtcccacccatcttgctata
ttgtctcaaccaccagatacaattcatggttcactccgtgtcactgtcca
aggtgaagttattgagcagtcgtttggagaggagctcttgtgttttagaa
cactccagcgtttcacagctgctacacttgaacatggcatgcatatgcca
gtttcaccaaaaccggaacggcgtgcacttatggacgaaatggcagttgt
atctacagaggactatcgctccattgttttccaagaaccccgatttgtgg
agtacttccgtcttgctacaccggagctggagtatggtcggatgaacatt
ggcagtcgcccctcaaagcgaaagcctagtggaggcattgagtcccttcg
tgcaatcccatggattttcgcctggacacaaacaaggttccatcttccag
tgtggttaggcttcggagcagccttcagacatgtcattaagaaggacatt
aagaatcttcacatgctgcaagagatgtacaaccaatggcctttcttcag
ggtcactattgatttggttgaaatggtgtttgccaagggaaaccccggaa
tagctgcgttatatgataaactccttgtttcagaagacctatggtcattc
ggagagctattacggtccaactatgaagaaaccaagaactttctgttaca
gattgctggacacaaggatcttctcgaaggtgacccgcacttgaagcaaa
ggctccgcctgcgtgattcatacatcacaaccctcaatgtttgccaagca
tatacactgaaacggatccgtgatccaaacttccacgtgacactgcggcc
acacatctcaaaggaaatcaacgaaacaaacaagccggctaatgaacttg
taaagctgaacccaacaagcgagtacgcgcctggtctggaggacaccctc
atcttgacaatgaagggtattgctgccggcttacagaacaccggttaa back to top
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